Clostridium beijerinckii NCIMB 8052: Cbei_0351
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Entry
Cbei_0351 CDS
T00547
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03420
Nucleotide excision repair
cbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cbei_0351
03430 Mismatch repair
Cbei_0351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbe03400
]
Cbei_0351
Enzymes [BR:
cbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cbei_0351
DNA repair and recombination proteins [BR:
cbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cbei_0351
MMR (mismatch excision repair)
Other MMR factors
Cbei_0351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DUF5604
AAA_14
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABR32539
UniProt:
A6LQA9
LinkDB
All DBs
Position
420801..423068
Genome browser
AA seq
755 aa
AA seq
DB search
MDLKSLLNKEQYEGATTIDGQVLILAGAGSGKTRVLTHRMAHMIEDLDIAPYSILAITFT
NKAAKEMKDRVKALIGERAENMWISTFHSTCVRILRREIDKIGYKSSFTIYDSSDQKTLV
KECMKTLNINDKDITEQEIMGKIGKAKDRMQSVRSFMLENEANFREKKIADVYEMYQKRL
KENNALDFDDLIFKTVELFKNNPGVLEFYQNKFKYIMVDEYQDTNGAQYELVKLLASKYK
NICVVGDDDQCIYQWRGADIQNILDFEKDYPGAKVIKLEQNYRSKGNILSAANVVIVNNA
NRKSKVLRTEQEPGNKIKIYRAYADSDEGDFVSKQILDIKNKEDKNYNDFAILYRTNAQS
RIFEESFRRKGVPYKIVGGTRFYDRKEIKDVLAYLKVIVNPQDDISIRRIINVPKRSIGD
ATVAKVQEFASSFEFDLWDALAEVRSIPTLTSRNVSTIEPFVALMENFMELSETVPVSVL
IESILKDTGYLKQLQESNEIEDKSRIENLKELVSDAADFEKNNEDKSLSAYLERVSLVQD
TDKIEEEDDAVVLMTIHSAKGLEFPVVFMVGMENGIFPGNASFEKESEMEESRRLCYVGI
TRAKQTLFMTSAEVRRVFGKTVAYPQSDFINEIKPDLKEYVGVKKESAKSREKIMQSNSY
TNPHSLRNSVTGNRAYTLNNGGINNVIDRSTMNEMAKEYISVSEATLGRKVIHEKFGKGT
IVAVQDSGNDKKLTVAFDKQGVKSLLLSFAKLKMI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaatcattacttaataaagaacaatatgaaggggcaactacaattgatggg
caggtacttattttagctggagctggttcaggtaaaacaagagttttgacacatagaatg
gcacacatgattgaagatttagatattgcaccttatagtatattagctattacttttaca
aataaggcagcaaaggaaatgaaggatagagttaaggcacttattggtgaaagagcagaa
aatatgtggatatccactttccattcaacttgtgttaggatactaagaagagagatagat
aagataggctacaaaagtagttttactatatacgatagctcagatcaaaagacattagtt
aaagagtgtatgaaaacacttaatattaatgataaagatataacagaacaagagataatg
ggaaagataggaaaagctaaagatagaatgcaaagtgttagaagctttatgttagaaaat
gaagctaactttagggaaaagaaaattgcagatgtttatgaaatgtaccaaaagagatta
aaagaaaacaacgcgttggattttgatgatttaattttcaaaacagttgagcttttcaaa
aataatcctggagtattggagttttaccaaaataaattcaaatatataatggttgatgag
tatcaggatactaatggcgctcaatatgagttggttaaattacttgcttcaaaatataag
aacatatgtgttgttggagatgacgatcagtgtatttaccagtggagaggtgcggatatt
caaaatatactagattttgaaaaagattatccgggagctaaagtaattaagctagaacaa
aattatagatcaaaaggaaatatactaagtgcagctaatgtagtaattgttaataatgca
aatagaaaaagtaaagtattaaggacagaacaagagccaggaaataaaattaaaatatat
agggcctatgctgatagtgatgaaggagactttgttagtaaacaaatcttagatataaag
aataaagaagataaaaattataatgactttgctatactatacagaacaaatgctcagtcg
agaatttttgaagaaagttttagaaggaagggagtcccttataaaatagtaggaggcaca
agattctatgacagaaaagagataaaagatgtattagcatatttaaaagttattgttaat
cctcaagatgatattagcattagaagaataataaatgtacctaagaggagcattggtgat
gcaactgttgcaaaggttcaagaatttgcaagcagctttgagtttgatttatgggacgca
ttagctgaagtaaggagtattccaacattaacgtcaagaaatgtttcaacaattgaaccc
tttgttgcgctcatggaaaatttcatggaactcagtgagacagtccctgtttcagtactt
attgaatcaatattaaaagatactggatatctaaaacaattacaggaatcaaatgaaatt
gaagacaagagtagaattgaaaatttaaaagagcttgtttcagatgcagctgattttgaa
aagaacaatgaagacaaatcgttatctgcttatttagagagagtttctctagttcaggat
acagataagattgaagaggaagatgatgcagtagtattaatgacaatccatagtgcaaag
gggttggagttccccgttgtatttatggttggtatggaaaatggtatttttccagggaat
gcgtcatttgaaaaagaatcagagatggaagagtcaagaagattatgttatgttggtata
actagagcaaaacagacattgtttatgacttcggcagaggttaggagagtatttggtaaa
acagtagcatatcctcaatctgattttattaatgaaataaagccagacttaaaagaatat
gttggagttaaaaaggaaagtgctaaaagcagggagaagatcatgcaaagcaattcctac
actaacccacacagtttaagaaatagtgttacaggtaatagagcatatactcttaataat
ggcgggattaataatgtaattgatagaagtactatgaatgaaatggctaaagaatatata
tctgttagtgaagcaacccttggaagaaaagtaattcatgaaaagtttggaaaaggaaca
attgtggctgtccaggattcaggtaacgataagaaattaacggttgcgttcgataaacaa
ggtgttaagtcattattattatcttttgcaaaacttaaaatgatttag
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