Clostridium beijerinckii NCIMB 8052: Cbei_4864
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Entry
Cbei_4864 CDS
T00547
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cbe
Clostridium beijerinckii NCIMB 8052
Pathway
cbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cbei_4864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbe03400
]
Cbei_4864
DNA repair and recombination proteins [BR:
cbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cbei_4864
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cbei_4864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
AAA_22
AAA_7
Microtub_bd
Kinesin
AAA_14
AAA_5
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABR36970
UniProt:
A6M2Z0
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Position
complement(5697722..5699695)
Genome browser
AA seq
657 aa
AA seq
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MGEFKIQSRFKPTGDQPQAIDKLVNSIKSNNRAQTLLGVTGSGKTFTMANVIEKLQRPTI
ILAHNKTLAAQLCSEFKEFFPDNIVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPDEYKKLTISLRTGMEKERDEVIKKLIEIQY
ERNDIDFSRGTFRVRGDSLDIIPASYSNKGIRIEFFGDEIDRIREFDVLTGSILGERNHV
AITPASHFATSRETVDKAIGIIEGELEERLRELNAQDKLLEAQRLRQRTNFDIEMIKEMG
YCSGIENYSRILDGRASGTPPKTLIDYFPEDFLMFIDESHVTLPQVRAMYAGDRSRKNTL
VDYGFRLPCAYDNRPLKFEEFEKKINQVVFVSATPSAYEIDNSEEIAEQIIRPTGLLDPE
IIIRPIKGQIDDLYGEINKTIECGFRILITTLTKRMSEDLTKYLIELGVKTTYMHSDIDT
IERMKIIRDLRLGEYDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESKVIMYADNITKSMDKAMKETERRRAIQKDYNERHGIVPTTIIKDVRDIIEATKV
AEEVEEYKAADKKKLTKKEKDKLIKDLTEEMLLAAKNLQFERAAELRDIINEIKDGK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatttaaaatacaatcgagatttaaacctacaggggatcaaccacaagcaatc
gataaattagtcaattccataaaaagcaataatagagctcaaactttgcttggagtaaca
ggctcaggaaaaacatttactatggcaaatgttatagaaaaattacaaagacctactata
atattagctcataataaaactttagcagcgcaattatgttcggaatttaaggagttcttt
cctgataatatagtagaatactttgtatcttattatgactattatcaaccagaagcatat
gtgcctcaaacagatacctttatagaaaaagatgcatcaattaatgatgaaatagataaa
ttaaggcattcagctacttcagctctttttgaaagaagggatgtaataattgtcgcatct
gtttcctgcatatacgggctaggtaatccagatgaatataaaaagttgactataagtctt
agaactggaatggagaaagagagagatgaggttataaagaaactcatagaaattcaatat
gaaagaaatgatatagatttttcaagaggaacttttagagttagaggagattctttagat
ataattcccgcttcgtattcaaataaagggattagaattgaattttttggggatgaaatt
gatagaataagagaatttgatgtattaacaggaagtatcctaggagaaagaaatcatgta
gccataactccagcatcccactttgcaacatctagagagactgttgataaagcaattggc
ataattgaaggagaattagaggagaggcttagagaacttaatgctcaggataaactttta
gaagctcaaagattaaggcaaagaactaactttgatattgagatgataaaagaaatggga
tattgtagtgggattgagaattattctagaatattagacggtagagcttcaggaacacca
cctaaaacattaatagattattttccggaagattttcttatgtttatagatgagagccac
gtaacattacctcaggttagagcaatgtatgcaggagatagatcgagaaaaaatacattg
gtagactatggatttagattaccttgtgcatatgataatagaccgctaaaatttgaggaa
tttgaaaagaaaattaatcaagtagtgtttgtaagtgctactccatcggcttatgaaata
gataattctgaagaaatcgctgaacaaatcataaggcctacaggattgttagatccagaa
atcattataaggcccattaaaggacaaattgatgatttatatggagagattaataaaacg
atagagtgtggatttagaatattaataactacattaaccaagcgtatgtcagaagattta
actaaatatttaatagaacttggtgttaaaacaacttatatgcattcagatatcgatacg
atagaaagaatgaaaataataagagatttgaggcttggtgagtatgatgtacttgtagga
ataaatcttttaagagaaggattagatataccagaggtagctttagttgcaattttagac
gctgataaagaaggatttttaagatcagaaacatcattaatacaaacaataggaagagcg
gctagaaattcagaaagcaaggttataatgtatgctgacaatataacaaagtctatggat
aaagcaatgaaggaaacggaaagaagaagagctatacaaaaagattataatgaaagacat
ggaatagtaccaacaacaataattaaagatgtaagagatattatagaagcaacaaaggtt
gcagaagaagtcgaagaatataaagctgcggataagaaaaaacttactaagaaagaaaaa
gataagttaattaaagatcttacagaagaaatgcttttagcggcaaaaaatcttcaattc
gaaagagcagctgagcttagagatattattaatgaaattaaggatggaaagtaa
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