Cognaticolwellia beringensis: B5D82_09410
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Entry
B5D82_09410 CDS
T05628
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5D82_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cber03021
]
B5D82_09410
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_09410
Enzymes [BR:
cber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5D82_09410
Transcription machinery [BR:
cber03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5D82_09410
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5D82_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASP47954
UniProt:
A0A222G9C1
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All DBs
Position
2213016..2214005
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLRPRLVDIETISATRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAISLEGKNEAVLTLTKSGEGPVTAADIQHDGD
VEIANPTHVICHLTGDGSISMRIKVEMGRGYVPASARRDAEEEDRAIGRLLVDASFSPVV
RIAYDVDSARVEQRTDLDKLVLDMETNGTLDPEEAIRRASTILAEQLDAFVELRDVTEVE
PKEEKPLFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaaccgaattccttagaccacgattggtagatattgaaactattagt
gctactcgtgctaaagtaactttagagccattagagcgtggttttggtcacactttaggt
aatgcgttacgccgcattcttttatcttcaatgccgggttgtgctgtaactgaagttgaa
attgacggtgtacttcatgagtacagcagtaaagaaggtgtgcaagaagacatcatcgaa
atactgttaaaccttaagggactagctataagtttagaaggcaaaaatgaagctgttctt
accttaactaagtccggtgaaggccctgtaacggctgccgatatccaacatgacggtgat
gtagaaattgcaaacccaactcatgtaatctgtcatttgacaggtgatggctctatcagt
atgcgtataaaggttgaaatgggacgtggttatgttccagcttctgcccgacgtgatgcc
gaggaagaagatcgtgcaatcggacgtttgttagttgatgcttcattcagtcctgttgta
agaattgcctatgatgttgattctgcacgtgttgaacagcgtacagatttggacaaactg
gtcttagacatggaaactaacggtacgttagatcctgaagaagcaattcgtcgcgcttca
acaattttagctgaacagctagatgcgtttgtagagcttcgtgatgtaactgaagttgaa
ccaaaagaggaaaaaccactgtttgatcctattttgcttcgtcctgttgatgaccttgaa
cttactgttcgttcagcaaactgcctaaaagcagaagcaattcaatatattggcgattta
gtacagcgtgctgaagttgagcttcttaaaacacctaatttaggtaagaagtctttaact
gaaatcaaagacgttttggcgtctcgtggtttgtctctaggtatgcgcctagaaaactgg
ccacctgaaagcatagctgataacgactaa
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