Clostridium botulinum F Langeland: CLI_1512
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Entry
CLI_1512 CDS
T00563
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbf
Clostridium botulinum F Langeland
Pathway
cbf03420
Nucleotide excision repair
cbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLI_1512
03430 Mismatch repair
CLI_1512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbf03400
]
CLI_1512
Enzymes [BR:
cbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLI_1512
DNA repair and recombination proteins [BR:
cbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLI_1512
MMR (mismatch excision repair)
Other MMR factors
CLI_1512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
DEAD
AAA_30
ResIII
AAA_22
Flavi_DEAD
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABS42625
UniProt:
A7GDB7
LinkDB
All DBs
Position
1588464..1590476
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AA seq
670 aa
AA seq
DB search
MIDYSFLDQYQKEAVKCHKDNTLVVAPPGSGKTTVIINRVVHLIEDLKINPNNILVITFT
RAAAMNMKERYKKISVSRRTPFFGTFHGLFYKILNRHFKNINIISSKEAYSLINNILISY
LDSVNEDKVRDVLNDISLFKTSGLNMKDFVPKIDKSIFEHCFNSYEEYKDKKELLDFDDL
QINMFKLLKEDERILKGYNKLFKYILVDEFQDCDTLQINILQMLSEGNSLFAVGDEDQCI
YSFRGSKPECMVDFNHYFKKGEKIYLRYNYRSPKNIVEISKNLIKNNKLRNNKRIEAYND
YDKNIVLKSFLNEREQAEEISKIINDIIKKGYGYKDVAILYRTNMESRSLTDLFFKKRIP
FRLLDKGYNFFNHFVCRDILAYMQVCIDSYDKKSFLKIINKPFRYISKLNVERVRRYKYA
KNSFDILKEQKDIQPFQIKNLEDLEKDINKMNKMSAQDAIGHIIHNLGYEEYIKEYSERI
KIDKEELLQIVDELKEAAEEYISILTFLVHVEEVEKEINKKEINEDSVILSTIHGVKGME
FKNVVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKENSN
FIKECKLDKELLENDYFKGKERVIHKVFGEGIIENQGENYVEIGFLDGTKRKFDRNVITK
SNIIKKKSVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgatagattatagtttcttagatcagtatcaaaaggaagcggttaaatgtcataaggat
aatacattagtagtagctccacctggttccggtaaaactactgttattataaatagagtt
gtgcatttaatagaggatttaaaaataaatcctaataatatattagtaataacttttact
agggctgcagctatgaatatgaaggaaagatataaaaaaataagtgtcagtaggagaaca
cctttttttggaacatttcatggccttttttataaaatattgaacagacactttaaaaat
ataaatataataagtagcaaggaagcctattctctaataaataatatacttatatcttat
ttggattctgtaaatgaggataaggtaagagacgttttaaatgatatatcactttttaaa
actagtgggttaaatatgaaggatttcgttcctaaaattgataaaagtatatttgaacac
tgttttaatagctatgaagagtataaagataaaaaagaacttttagattttgatgatttg
caaattaatatgtttaaacttttaaaggaagatgaaagaattcttaagggttataataaa
ttatttaaatatatattagtagatgaatttcaagattgtgatacattgcaaataaatatt
cttcaaatgttaagtgaggggaattctctattcgcagtaggggatgaggatcagtgtata
tattcatttagaggatccaagccagagtgtatggtagattttaatcattattttaaaaaa
ggagaaaagatatatctaagatataattatagaagccccaaaaatatagtagagatttct
aaaaatcttattaaaaataataaattaagaaataataagagaatagaagcttataatgat
tatgataagaatatagtgttaaaatcctttctaaatgaaagggagcaagcagaggaaata
agtaaaataattaatgatattataaagaagggctatggatataaagatgtagccatactt
tataggactaatatggaaagtagaagtttaacagatttgttttttaaaaaaagaatacct
tttagacttttagataagggttataatttttttaatcattttgtatgtagggatatacta
gcttatatgcaggtttgtatagattcctatgataagaaaagttttttaaagattataaat
aaaccctttaggtatataagtaaattaaatgtggaaagggtaagaagatataaatatgct
aaaaatagctttgatatattaaaggaacaaaaggatatacaaccttttcaaattaagaat
ttagaagatcttgaaaaggatataaacaaaatgaataaaatgagtgcccaagatgccata
ggtcacataatccataatttaggctatgaagagtatattaaagaatatagtgaaagaata
aaaatagataaagaagaacttttacaaatagtagatgaattaaaagaagcagctgaagaa
tatataagtattttaacctttttagttcatgtagaggaagtagaaaaagaaataaataaa
aaagaaataaatgaagatagtgtaatattaagtacaatacatggagttaagggcatggaa
tttaaaaatgtagttattgtgaattgtaatgaaggtaatattccttacagtaaagcagat
gaagaagttaatatagaggaagagagaagacttttttatgtaggtataacaagggcaaaa
gaaaacttatatttaactgtaccaaaggttataagagggaaaaataaagaaaactctaat
tttataaaggaatgcaagttagataaagaattattagaaaatgattattttaaaggaaaa
gaaagagtgattcataaggtatttggtgaaggaatcattgaaaatcaaggggaaaattat
gtagagataggatttttagatggaactaaaagaaaatttgatagaaatgttataactaaa
agtaatattattaaaaagaaaagtgtatcataa
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