KEGG   Clostridium botulinum F Langeland: CLI_1512
Entry
CLI_1512          CDS       T00563                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbf  Clostridium botulinum F Langeland
Pathway
cbf03420  Nucleotide excision repair
cbf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLI_1512
   03430 Mismatch repair
    CLI_1512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbf03400]
    CLI_1512
Enzymes [BR:cbf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLI_1512
DNA repair and recombination proteins [BR:cbf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLI_1512
   MMR (mismatch excision repair)
    Other MMR factors
     CLI_1512
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 Viral_helicase1 UvrD_C_2 AAA_12 AAA_11 DEAD AAA_30 ResIII AAA_22 Flavi_DEAD AAA_29
Other DBs
NCBI-ProteinID: ABS42625
UniProt: A7GDB7
LinkDB
Position
1588464..1590476
AA seq 670 aa
MIDYSFLDQYQKEAVKCHKDNTLVVAPPGSGKTTVIINRVVHLIEDLKINPNNILVITFT
RAAAMNMKERYKKISVSRRTPFFGTFHGLFYKILNRHFKNINIISSKEAYSLINNILISY
LDSVNEDKVRDVLNDISLFKTSGLNMKDFVPKIDKSIFEHCFNSYEEYKDKKELLDFDDL
QINMFKLLKEDERILKGYNKLFKYILVDEFQDCDTLQINILQMLSEGNSLFAVGDEDQCI
YSFRGSKPECMVDFNHYFKKGEKIYLRYNYRSPKNIVEISKNLIKNNKLRNNKRIEAYND
YDKNIVLKSFLNEREQAEEISKIINDIIKKGYGYKDVAILYRTNMESRSLTDLFFKKRIP
FRLLDKGYNFFNHFVCRDILAYMQVCIDSYDKKSFLKIINKPFRYISKLNVERVRRYKYA
KNSFDILKEQKDIQPFQIKNLEDLEKDINKMNKMSAQDAIGHIIHNLGYEEYIKEYSERI
KIDKEELLQIVDELKEAAEEYISILTFLVHVEEVEKEINKKEINEDSVILSTIHGVKGME
FKNVVIVNCNEGNIPYSKADEEVNIEEERRLFYVGITRAKENLYLTVPKVIRGKNKENSN
FIKECKLDKELLENDYFKGKERVIHKVFGEGIIENQGENYVEIGFLDGTKRKFDRNVITK
SNIIKKKSVS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgatagattatagtttcttagatcagtatcaaaaggaagcggttaaatgtcataaggat
aatacattagtagtagctccacctggttccggtaaaactactgttattataaatagagtt
gtgcatttaatagaggatttaaaaataaatcctaataatatattagtaataacttttact
agggctgcagctatgaatatgaaggaaagatataaaaaaataagtgtcagtaggagaaca
cctttttttggaacatttcatggccttttttataaaatattgaacagacactttaaaaat
ataaatataataagtagcaaggaagcctattctctaataaataatatacttatatcttat
ttggattctgtaaatgaggataaggtaagagacgttttaaatgatatatcactttttaaa
actagtgggttaaatatgaaggatttcgttcctaaaattgataaaagtatatttgaacac
tgttttaatagctatgaagagtataaagataaaaaagaacttttagattttgatgatttg
caaattaatatgtttaaacttttaaaggaagatgaaagaattcttaagggttataataaa
ttatttaaatatatattagtagatgaatttcaagattgtgatacattgcaaataaatatt
cttcaaatgttaagtgaggggaattctctattcgcagtaggggatgaggatcagtgtata
tattcatttagaggatccaagccagagtgtatggtagattttaatcattattttaaaaaa
ggagaaaagatatatctaagatataattatagaagccccaaaaatatagtagagatttct
aaaaatcttattaaaaataataaattaagaaataataagagaatagaagcttataatgat
tatgataagaatatagtgttaaaatcctttctaaatgaaagggagcaagcagaggaaata
agtaaaataattaatgatattataaagaagggctatggatataaagatgtagccatactt
tataggactaatatggaaagtagaagtttaacagatttgttttttaaaaaaagaatacct
tttagacttttagataagggttataatttttttaatcattttgtatgtagggatatacta
gcttatatgcaggtttgtatagattcctatgataagaaaagttttttaaagattataaat
aaaccctttaggtatataagtaaattaaatgtggaaagggtaagaagatataaatatgct
aaaaatagctttgatatattaaaggaacaaaaggatatacaaccttttcaaattaagaat
ttagaagatcttgaaaaggatataaacaaaatgaataaaatgagtgcccaagatgccata
ggtcacataatccataatttaggctatgaagagtatattaaagaatatagtgaaagaata
aaaatagataaagaagaacttttacaaatagtagatgaattaaaagaagcagctgaagaa
tatataagtattttaacctttttagttcatgtagaggaagtagaaaaagaaataaataaa
aaagaaataaatgaagatagtgtaatattaagtacaatacatggagttaagggcatggaa
tttaaaaatgtagttattgtgaattgtaatgaaggtaatattccttacagtaaagcagat
gaagaagttaatatagaggaagagagaagacttttttatgtaggtataacaagggcaaaa
gaaaacttatatttaactgtaccaaaggttataagagggaaaaataaagaaaactctaat
tttataaaggaatgcaagttagataaagaattattagaaaatgattattttaaaggaaaa
gaaagagtgattcataaggtatttggtgaaggaatcattgaaaatcaaggggaaaattat
gtagagataggatttttagatggaactaaaagaaaatttgatagaaatgttataactaaa
agtaatattattaaaaagaaaagtgtatcataa

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