Clostridium botulinum B Eklund 17B (NRP): CLL_A1339
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Entry
CLL_A1339 CDS
T00696
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLL_A1339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbk03019
]
CLL_A1339
03009 Ribosome biogenesis [BR:
cbk03009
]
CLL_A1339
Messenger RNA biogenesis [BR:
cbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLL_A1339
Ribosome biogenesis [BR:
cbk03009
]
Prokaryotic type
rRNA helicases
CLL_A1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SMC_N
HdcB
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACD23724
UniProt:
B2TJC1
LinkDB
All DBs
Position
complement(1373967..1375115)
Genome browser
AA seq
382 aa
AA seq
DB search
MTKSLNDLNLSSDIINALEKQNITVPTEIQSLVINEALENKDIMGESFTGSGKTLAYLLP
IFERINTETKDIQAIILAPTHELVMQIEAQIKLLSDNSGINVKSLGIIGDVNINNQIKKL
KEVKPHIIVGSTGRVLDLIRKKKITAHTIKTIVIDEVDNLLDPKRAQIVKDIIKTTMRDR
QLMAFSASITPEIVDSLNELMKDPLIVKSQGKSSINPNISHVYVKCDRRDKFEVLRKIIA
AEDPKRALIFVNDNKDIELTSLKLNYHNRECFAMSGSISKEERKNAIDSFKTGKIKILVS
SDVSARGLDITDITHVFNLDLPLKLDEYLHRSGRTARGNAKGTSICIVTDKQMNIIKKYE
KAFDVEFQEKIISNGILKNKDK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcattaaacgatttaaatttaagttcagatataataaatgcattagaaaag
caaaatataactgttccaactgaaattcaaagtttagttataaatgaagctttagaaaat
aaagatataatgggagaatcatttactggaagtggtaaaactttagcgtaccttcttcct
atatttgaaagaataaatactgaaactaaagatattcaagcaataattttagcaccaact
catgaattagttatgcaaatagaggctcaaattaaattgctttcagataactctggaata
aatgttaaatcacttggaataatcggtgatgttaatataaataatcaaattaaaaagctt
aaagaagttaagcctcatataatagttggatcaactggtagagttcttgatcttataaga
aagaaaaagatcactgctcatactataaaaactattgtcattgatgaagttgataattta
ttagatccaaagagagctcaaattgttaaagatataattaaaacaactatgagagataga
caattaatggccttttctgcttctattactcctgaaatagttgattcattaaatgaatta
atgaaagatccattaatagttaaatcacaaggtaaatcttcaattaaccctaacatttcg
catgtatatgtaaaatgtgatagaagagataaatttgaagtacttagaaaaataatagca
gctgaagatccaaaaagagcattaatatttgttaatgataataaagatattgaattaaca
tctttaaaacttaattatcataatagagaatgttttgctatgagcggaagtatttctaaa
gaagaaagaaaaaatgctattgatagctttaaaacaggtaaaatcaaaatattagtttct
tcagatgtatctgctagaggtcttgatattactgatattactcatgtatttaatttagat
cttccattaaaacttgatgaatacttacatagatctggtagaactgctagaggtaatgca
aaaggtacttctatctgtatagttactgataaacaaatgaacataataaaaaaatatgaa
aaagcatttgatgtagaattccaagaaaaaattatttctaatggaatacttaaaaataaa
gataagtaa
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