Clostridium botulinum A3 Loch Maree: CLK_3676
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Entry
CLK_3676 CDS
T00670
Symbol
sbcC
Name
(GenBank) exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbl
Clostridium botulinum A3 Loch Maree
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbl03400
]
CLK_3676 (sbcC)
DNA repair and recombination proteins [BR:
cbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLK_3676 (sbcC)
Archaeal homologous recombinant proteins
CLK_3676 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
ATP_bind_1
GFO_IDH_MocA_C2
Motif
Other DBs
NCBI-ProteinID:
ACA56415
UniProt:
B1KV36
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All DBs
Position
573043..576573
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AA seq
1176 aa
AA seq
DB search
MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIARDS
TQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKTTAARLVKNTYEEEEII
ADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIFGLEKYGKK
LLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYENLLKEKSKIAKEKEESNK
LYEKYKNIWELQEELDIYLNKLENLKKGLLNIEEKKIKVENGKNALSVKPYIDELSKIES
DRNINEEELQTAMEQLKNIDLNLKNIEEEYKKVSKDKEEEIPLLMQKENNLLQAIEIKKK
VEVIKRERADLVQKYKEEGSLIRNKNIGKKHIEENINKISKEIKLKEEEINSLKIDGDRR
EKIQKLYEIDKEYKRLNLEVCSITERVNIKIKSLKEYELKYKDILEIQRDINKKLEYVSS
KREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKINDRKQELEKNLKEKQVVKLNLEKQ
YKEILEMLKSREETVVSLDEKIKNIEKMDMASILATNLKEQEPCPVCGSMHHIKLAEKVD
IKELEILKEDHRNAFKELENIKIEEKEKNILLISVEKEEELILEELENLKEQLKDRNLED
LRGELQKEKNDFEKLNENIKDWEKEKLILEENIIKLQKEKNDIDKEEAKNHEAISKEKEL
IASIKKDMEEREILFKEKEKEYLNLKEEIKISNVEEEISRIRASDKKIEEYNKVIKNERE
VLESENNKREETIKQINIMEIELGKIIEAGKEKKNFIDKEEEEIKKLNVGEISIEHLNQV
KKSIGNIKEKEEILKSKLELEVKNREILWKNKISKEQIKINLEKLYNEKYIQLNKVLEEN
KFHTLEDAKLMLICKEEIKELEKEIEEFEKEYNSLNINIERVNKKLKGERIEEGSWKDIR
LKKENKEKELEDIIKNIVIEEKLISDMENNIKSLKNLLDEKEKVAHRKALLEDIDKLVQG
NKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMRDDFNGGGIRPTNTLSG
GETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDKLSV
GIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaagaaacttgtgattaaaggactaaacagttttatagaaaaacaggaaata
gactttgaaactttagtcaatagaggtttgtttggcatatttggccctacaggtagtgga
aaatccagtatattagatgctataactatggctttatatggagatatagcaagggatagt
actcagtttataaatttagatacggattctttatttgtaagctatgagtttcaaatagcc
tcagtagatgaaagagatgattatattgtttctagaactgtaaaaagagataaaaaaggt
ggttataagactaccgcagctaggttagttaaaaatacttacgaggaagaagaaataata
gcagataagccgagagatatacaaaaaaatatagagtctataataggtttaacagcagaa
gattttactcgttcagtagtgttgccacaaggtaaatttagtgagttcttgaagttaagt
ggaaaaagtagaagagatatgttagagagaatatttggattagagaagtatggcaaaaaa
cttttagaaagaataagaaaagcaagaaataaggaaatatcctctttaacattaatagaa
ggaagattagaacagtataaagatatatccaaggaaaaattacaggaactaaaaatacaa
tatgaaaatttgttaaaagaaaaatctaaaatagcgaaagaaaaagaagaaagcaataag
ctttatgaaaaatataaaaatatatgggaacttcaagaggaattagatatttatttaaat
aaattagaaaatcttaaaaaaggtttactaaatattgaagagaaaaaaataaaagtagaa
aatggaaagaatgcattaagtgttaaaccctatatagatgaacttagcaaaattgaatca
gatagaaatataaatgaagaggaattacaaactgcaatggagcagttaaagaatatagat
ttaaatttaaaaaatatagaagaagaatacaagaaagtatcaaaggataaagaagaagaa
atacctttattaatgcagaaagaaaataatttactgcaggctatagaaataaagaagaag
gttgaagttataaagagggaaagagcagacttagtacaaaaatataaggaagagggaagc
ttaataagaaacaaaaatataggtaaaaaacatatagaggaaaatataaataagatttct
aaggaaataaaattaaaagaagaagaaataaattcattaaaaatagatggagacagaaga
gaaaagatacaaaaactatatgaaatagataaagaatataaaagattaaatttagaagtt
tgtagtataacagaaagagtaaatataaaaataaagagcttaaaagagtatgaattaaag
tataaagatatattagaaatacaaagggatataaataaaaaattagaatatgtttcaagc
aaaagagaagatttaataaaaaactctcctgggaacaatgatattttgcttgataaaaaa
gattatataaataaattaatggaaatttttaatgatttaaataaaataaatgatagaaaa
caggaattagaaaaaaatttaaaagaaaaacaagtagtaaaattaaatttagaaaaacag
tataaagaaatattagaaatgttaaagtctagagaagaaacagttgtgagcctagatgaa
aaaataaaaaatatagaaaaaatggatatggcttctatattagctactaatttaaaggaa
caagaaccttgtcctgtatgtggatctatgcatcatattaaattagctgaaaaggtagat
ataaaagaattagaaattctaaaagaagatcatagaaatgcatttaaagaattagaaaat
ataaaaatagaggaaaaagaaaaaaatatacttttaatttctgtggaaaaagaagaagaa
ttaatattagaggaattagaaaatttaaaagagcaattaaaggatagaaacttagaggat
ttaaggggagaactacaaaaagaaaaaaatgattttgaaaaattaaatgaaaatataaaa
gactgggaaaaagaaaaattaatattagaagaaaatataatcaagctacaaaaagaaaaa
aatgatatagataaagaggaagctaaaaatcatgaagctatatcaaaggaaaaagaatta
atagcttctataaaaaaggatatggaagaaagagaaatattatttaaggaaaaagaaaaa
gaatatttaaatttaaaagaagaaatcaaaatttctaatgtggaagaagaaataagtaga
attagagcttctgataaaaaaatagaggaatataataaggttataaaaaatgaaagagaa
gttttagagagtgaaaataataaaagagaagaaacaattaaacagataaatattatggaa
atagagttaggcaaaataatagaagcgggaaaagaaaagaaaaattttatagacaaagaa
gaggaggaaataaaaaaattaaatgtgggagagatttctatagaacatttaaaccaagta
aaaaaatccatagggaatataaaggaaaaagaagaaatcttaaaatctaagttggagttg
gaagttaaaaacagagaaatactatggaaaaataaaataagtaaggaacaaataaaaatt
aacttagaaaaactttataatgaaaaatatattcagttaaataaagtcttagaggaaaat
aaattccatactttagaagatgcaaaattaatgttaatatgtaaagaagaaataaaagag
ctagaaaaagagatagaagaatttgaaaaagagtataatagtttgaatataaatatagaa
agagtaaataaaaaattgaagggggaaaggatagaggaaggaagttggaaagatataagg
cttaaaaaagaaaataaggaaaaagagctagaagatataattaaaaatattgtaatagaa
gaaaaacttataagtgatatggaaaataatataaagtcattaaagaacttattagatgaa
aaagaaaaggtagctcatagaaaggctttattagaagatatagataaattagttcaggga
aataaatttgtagagtttgtagctatgaatcagttagagtatatagttttcgaagcttct
aaaagacttaaggatatcactagaggaagatatgcattagaattagattgtaatggaaat
tttactatgagagatgattttaatggagggggcataagacctacaaatactttatctggt
ggagaaacctttttaacatcattggcactagctttggcgctatcttcacagatacaacta
aaaggaagctcccctttagaatttttctttttagatgagggctttggaactttagatagt
gagcttttagatacggttatgacttctttagaaaatttaagaagtgataaattaagtgta
ggaataataagtcatgtagaggaacttaaaaatagagtaccaataaagcttatagtagat
cctgcggtaccaggagagggtggaagtaaaataaaaatagagtatagctaa
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