Clostridium botulinum BKT015925: CbC4_0445
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Entry
CbC4_0445 CDS
T01475
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03030
DNA replication
cbn03430
Mismatch repair
cbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CbC4_0445 (dnaE)
03430 Mismatch repair
CbC4_0445 (dnaE)
03440 Homologous recombination
CbC4_0445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbn03032
]
CbC4_0445 (dnaE)
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_0445 (dnaE)
Enzymes [BR:
cbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CbC4_0445 (dnaE)
DNA replication proteins [BR:
cbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CbC4_0445 (dnaE)
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CbC4_0445 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
BRCT_2
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
AEB75125
LinkDB
All DBs
Position
469250..472756
Genome browser
AA seq
1168 aa
AA seq
DB search
MNMGERNFVHLHTHTEYSLLDGSGKIGGLISRAKELGMKSLAITDHGTMFGCVDFYKKAK
EAGIKPIIGCEIYVASNSMHIKRLDSENRNHHLVLLVKNEQGYKNLMKIVSKAAIDGFYY
KPRVDHEYLKEHSEGLIALSACLAGEVSYNLLNGTKDKAREVALFYKDIFKEGFYIELQY
HGIDKQLRVNEMLVELARELDIPLVATNDVHYIKKEDAKSHEVLLCIQTGKTLDDEDRMR
YEPQKFYLKSPEEMYETFSYVSEALENTNKIADECNFDYVFHESKLPNFPLPEGADHFEY
MKELCYKGLEVRYLEVTDELKERLEYELGVIKQMGYVDYFLIVWDFFRFSHEKGIMTGPG
RGSAAGSLVAYTLGITKIDPIKYNLIFERFLNPERVSMPDIDSDFCYERRGEVIDYVVEK
YGKENVSQIVTFGTMAPRACIRDVGRAMNYSYAEVDRIAKMIPTVLGITIDKALEMNPEL
KEVYDKDMRIKELIDVARDLEGLPRHTSTHAAGVVIASQPLVSYVPLSKNEEAIVTQFTM
TTLEELGLLKMDFLGLRTLTVIRDAIELIKKNTGTKIDLDKINFEDENVYNMLGRGKTVG
VFQLESAGMTNFMKELKPESLEDIIAGISLYRPGPMAEIPKYIKNKNNPKNIEYITPKLE
GILNVTYGVMVYQEQVMQIVRDLAGYSMGRSDLVRRAMSKKKHKVMEEERKNFIYGIEED
GKVVVPGCLRNGISEDAANKIYDQMMDFASYAFNKSHAAAYAVVAYYTAYLVHYYPTEFM
AAMLNSVRGNSDKVAIYIRAAKQMDIETLPPDINKSFGKFTVQNGKIRFGLSAIKNVGEN
IIDVIVKSREEKGEFNSFVDFCNKISMGSINKRMVESLIKAGVFDCFGIYRSQLLAVYEK
IIDSVVNQRKKNIEGQVSLFGSFDNEFKDTEIKYPAIDEFNKKSKLAMEKEMTGLYLTGH
PLEDYEEILKNATSAKTTDIIIDESLEENLIDEVSLHVEEQNSKIKDGDKVIIGGLITNV
TRKITKTNSMMAFITLEDLYSSIEVIIFPKTLERFNNTIMEDEIVLIKGRVTKREDEQPK
ILCDHIEKVFNFSNKKFYIQVQEKRDVKPTINEIKSIAIRNNGNIPIYICTKDERKKYLV
SREYWVNDTDEVATVFKQRYGKDNVKFI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgggagaaagaaattttgtacatttacatacacatacggaatatagtctttta
gatggttcaggaaaaataggtggtttaatatcaagagctaaagaacttggaatgaaaagt
cttgctataactgatcacggaacaatgtttggatgtgtagacttttataaaaaggctaaa
gaggcaggaattaaacctattataggttgtgaaatctatgtagcatcaaattctatgcac
attaaaagacttgatagtgaaaatagaaaccatcatttagtacttcttgtaaagaatgaa
caaggatataaaaatttaatgaagatagtatctaaggcagctatagatggattttattat
aaacctagagtagaccatgaatatttaaaggagcatagtgaaggacttatagctttaagc
gcttgtcttgctggagaggtttcttataatttattaaatggaacaaaggataaggcaaga
gaagtagctttattctataaagatatatttaaagaaggattctatatagaattacaatat
catggcatagataagcagcttagagttaatgaaatgctagtagaacttgcaagagaacta
gatataccactagttgctacaaatgatgttcattatataaaaaaagaagatgctaaatca
catgaggttttattatgtattcaaacaggaaagaccttagatgatgaagatagaatgaga
tatgagccacaaaaattttatttaaaatctccagaagaaatgtatgagacattttcttat
gtttctgaggccttagaaaatactaataaaatagctgatgaatgtaatttcgattatgta
tttcatgaatctaaacttcctaattttccactgccggaaggtgcagatcattttgaatat
atgaaagaattgtgttataaggggcttgaagttagatatctagaagtaactgatgaatta
aaagaaagattagaatatgaactaggcgttataaagcaaatgggatatgtagattatttc
ttaatagtttgggatttttttagattttctcatgaaaaaggaataatgacaggtccaggc
aggggatcagcggcaggttcacttgttgcatatacactaggaattacgaagattgatcct
attaaatataatcttatatttgaacgttttttaaatcccgaacgtgtatctatgcctgat
atagattctgacttttgctatgaaagacgtggggaagttattgattatgtagttgaaaaa
tacggaaaagaaaacgtatctcagatagttacgtttggaactatggcacctagagcatgt
ataagagatgttgggagagccatgaactattcttatgctgaagtagatagaatagccaaa
atgattccaacggttttagggattactattgataaagcattagaaatgaatccagaatta
aaagaagtttatgataaagatatgcgtattaaagaattaatagatgtagctagggattta
gaagggcttccaagacatacttctactcatgctgctggtgttgttatagcatcccaacct
ttagttagctatgtaccactttctaaaaatgaagaagcaatagtaacacaatttactatg
actacattagaagagcttgggcttttaaagatggactttttgggacttagaacattaaca
gttataagagatgctatagaacttataaagaaaaatactgggacaaaaattgacctggat
aaaataaattttgaagatgaaaatgtatataatatgcttggaagaggaaagacagtagga
gttttccaattggaatcagctggaatgactaactttatgaaggaactaaagccagagagc
ttagaagatataatcgctggaataagtctttatagaccaggccctatggctgaaatacct
aaatatattaaaaataaaaataatccaaagaatatagagtacattactcctaaacttgag
ggaatactaaatgtaacttatggagttatggtatatcaagagcaggttatgcaaattgtt
agagatcttgctggatattctatgggaagaagtgaccttgtacgtcgtgctatgtcaaag
aaaaagcacaaagttatggaagaagaaagaaagaactttatttatggtattgaagaagat
gggaaagtagtggttcctggatgtttaagaaatggtattagtgaagatgctgcaaataaa
atatatgatcaaatgatggattttgcaagttatgcatttaataaatcacatgccgcggca
tatgcagttgttgcatattatacagcctatttagtgcattattatccaacagagtttatg
gcagctatgcttaatagtgtaagaggaaatagtgataaagttgcaatttatataagggca
gcaaaacaaatggatatagaaactcttccacctgatataaataaaagctttggaaagttt
acagtacaaaatgggaaaatacgttttggtttatcagctataaaaaacgtaggtgaaaat
ataattgatgtaatagttaaatcaagagaagaaaaaggcgaatttaattcttttgtcgat
ttttgcaataaaatatcgatgggaagcattaataaaagaatggttgaaagtttaattaaa
gcgggagtttttgattgttttggaatttatcgttcacaacttttagctgtatatgaaaaa
ataattgattctgtggtaaaccaaaggaaaaaaaatatagaaggtcaagtaagtttgttt
ggtagttttgataatgaatttaaagatactgaaattaaatatccagcaatagatgagttt
aataaaaaaagtaaacttgctatggaaaaagaaatgacaggattatatttaacagggcat
ccattagaagattatgaagaaattttaaaaaatgcaaccagtgctaaaactacagatatt
attatagatgaatctttagaggaaaatcttatagatgaggtatcacttcatgtggaagaa
caaaattctaagattaaagatggagataaagtaattataggtggacttattacaaacgtt
actagaaaaataacaaaaactaatagtatgatggcgtttataactttagaggatttatat
agctcaatagaagttataatttttccaaagactttagaaagatttaataacacaataatg
gaagatgaaatagtattaataaaaggaagagttacaaaacgagaggatgaacaacctaaa
atactatgtgatcatatagaaaaagtttttaatttttctaataaaaaattctatattcag
gtacaagaaaaaagggatgtaaagccaaccataaatgaaataaaatctatagccattaga
aataacggaaatatacctatatatatttgtacaaaagatgaaagaaaaaagtatttagta
tcaagagagtattgggtaaatgatacagatgaagttgcaactgtatttaaacaaagatat
ggtaaagataatgtgaaattcatataa
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