Clostridium botulinum BKT015925: CbC4_2252
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Entry
CbC4_2252 CDS
T01475
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CbC4_2252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_2252
Enzymes [BR:
cbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CbC4_2252
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CbC4_2252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
AAA_22
PIF1
HHH_3
HHH_2
UvrD_C
HerA_C
DNA_pol_lambd_f
DEAD
SLFN-g3_helicase
AAA
nSTAND3
AAA_28
NTPase_1
ABC_tran
T2SSE
AAA_29
AAA_16
AAA_18
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AEB76917
LinkDB
All DBs
Position
complement(2450986..2453211)
Genome browser
AA seq
741 aa
AA seq
DB search
MTELNGTVEGIVFKNESNGYVVAHLKEKKKKITITGCIPYIMEGQNLKLQGEWVNHPHFG
QQFKVTACEEIVPNSLEGIEKYLSSGIISGIGPVTAKKIVEHFKEKTLEVLDENIEKLKE
IDGIGSKKVETIAKSYSKQREVRNIMVFLQTYGVTAKQCVKIHKKYGKDSINVVKENPYT
LTENISGIGFKTADKIARTLGIESDSPFRIQCGVRYIVNQFCGMGNTYMPLEKLLKESKD
ILGVKENEIMNNIQESVLNGKLKVENINKEECVFTMPYYYCELSVTSKILTLSTNSYDDI
NIDVDLQIEEFEGSNNIKFAKTQIEAIKGAFENGIEIITGGPGTGKTTIIKCITEIFENA
SMTVFMAAPTGRAAKRMSEATGRESKTIHRLLELGFNNDDDMEFLRSEESPLQCDVLIID
EASMIDILLMNNLLKAIPMGTRLIIVGDADQLPSVGPGNVLRDLIESKCVKVARLRDIFR
QAEESMIVVNAHKINNGEMPILNKKGKDFYFLNSENQDKVLDTLVGLIDTRLPKFNNNWN
KIKDIQILSPMRKGTLGIENLNSRLQEILNPKAKEKSELEFRDIIFRVGDKVMQTKNNYN
LKWNSISSDSDEEGAGVFNGDVGYIIGVSEDKITVVFDEDKEVVYDNMYLDELELAYAMT
VHKSQGSEFPVVIMPMFMGPPLLMNKNLFYTGITRAKQMVVLVGLYKAVNFMINNNRSFD
RYSALKWRILNILEGEVQESI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgagttaaatggaacggtagaaggtatagtatttaaaaacgaaagtaatggatat
gtagttgcgcatctaaaagagaaaaaaaagaaaataacaataacagggtgcataccgtat
ataatggaaggtcaaaatttaaagttgcaaggggagtgggttaatcatcctcattttgga
caacaatttaaagttactgcatgtgaggagatagtaccaaattctctagaggggatagag
aaatacctatcttcaggaataatatcaggaataggacctgtaactgcaaaaaagattgta
gaacattttaaagaaaaaactttagaagtattagatgagaatatcgaaaaattaaaagaa
attgatggtataggttcaaaaaaagtagagactatagcaaaatcatattcaaagcaaaga
gaagtaagaaatataatggtctttttacagacttatggggtaacagctaaacaatgtgtt
aaaatccataaaaaatatggtaaagattctataaatgtagttaaagaaaatccttatact
ttgacagaaaatatatctggaataggttttaaaactgctgataaaatagctagaactttg
ggtatagagagtgattcaccatttagaatccaatgtggagttagatatatagtaaatcaa
ttttgtggtatgggaaatacatatatgcccttagaaaaattattaaaagaatctaaagat
atacttggggttaaagaaaatgaaataatgaataatatacaagagtctgtacttaatggg
aaattaaaggtggaaaatataaataaagaagaatgtgtttttacaatgccatactattat
tgtgagttatcagttacaagcaaaatattaacgttaagtacaaatagttatgatgatata
aatatagatgtagatttacaaatagaggaatttgaaggaagtaataatataaaatttgca
aaaactcaaatagaagccataaagggtgcttttgaaaatggtattgaaataataacgggt
ggtcctggaacaggaaaaacaacaataataaagtgtataacagagatatttgaaaatgca
tctatgacagtgtttatggcagctcctacaggtagagcggcaaagaggatgagtgaggct
acaggaagagagtctaaaactatacatagattattggaacttggatttaataatgatgat
gatatggagtttttaagatcggaagaatcacccctacagtgtgatgttcttataattgat
gaagcttctatgatagatattttacttatgaataatcttttaaaggcaattcctatggga
acaagattaattattgttggagatgcagatcagcttccatcagtaggtcctggtaatgta
ttgagggatttaatagaaagtaagtgtgtaaaggtagcaagattaagggacatttttagg
caagcggaagaaagtatgattgtagttaatgcacataaaattaacaatggagaaatgcct
atattaaataagaagggaaaagatttttattttctaaattcagaaaatcaagataaagtt
ttagatactttggtaggacttatagatactagacttcctaagttcaacaataattggaat
aaaataaaagatatacagatactttcgcccatgagaaagggaactttaggaatagaaaat
ttaaatagtagactacaagaaattttaaatcctaaagccaaggaaaaaagtgaattagaa
tttagagatattatttttagggttggcgataaagtaatgcagacaaaaaataattataat
ttaaaatggaattctattagtagtgatagtgatgaagaaggggccggagtatttaatgga
gatgtaggatatataataggagttagtgaagacaagataactgtagtttttgatgaagat
aaggaagtagtatatgacaatatgtatttagatgaactagaacttgcatatgctatgaca
gtacacaaaagtcaaggaagtgaatttcctgtagtaattatgcctatgtttatgggacca
ccactacttatgaacaaaaatttattttatacgggtattacaagagctaaacagatggta
gttttagttggactttacaaggccgtaaattttatgataaataataatagaagttttgat
agatattctgcactaaagtggaggatattaaatatattagagggagaagttcaagaaagt
atataa
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