Clostridium botulinum A ATCC 3502: CBO1807
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Entry
CBO1807 CDS
T00533
Name
(GenBank) Composite protein include: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (N-terminus) and an RNA-associated domain (C-terminus)
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo00900
Terpenoid backbone biosynthesis
cbo01100
Metabolic pathways
cbo01110
Biosynthesis of secondary metabolites
cbo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CBO1807
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CBO1807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cbo03011
]
CBO1807
Enzymes [BR:
cbo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CBO1807
Ribosome [BR:
cbo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CBO1807
Bacteria
CBO1807
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
Spt6_S1
S1_2
CsrA
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CAL83346
UniProt:
A5I2S9
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All DBs
Position
complement(1926331..1928247)
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AA seq
638 aa
AA seq
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MNVILADKAGFCFGVKRALDTTINTKENLKGKIYTLGPLIHNNDVVNLLKDKGIEPISIQ
DVDKLNKDDTIIIRSHGVPLQTINYLKDKGLNVINTTCPHVANIQIKAKKYYEEGYKIVI
VGDENHPEVIGINGWCNNSAIISKDGANINNLDKKVCVLCQTTEKQENWEKVLTILIKNS
REILAFNTICNATQVRQQSAKKLSEKVDSMIVIGGKNSSNTTKLYEICKSNCKNTIHVEN
AKEIPEHIYKNSNIIGVTAGASTPDWIIKEAINKMNNNDSIIEVSKNEMLNYMNEKEQQI
VVGKVVKGTIVSLNENELFVDLSYKSEGIIPKEEVTLDEESILKESFKVGDEIEAKIVRI
KNEDGYVVLSLKELHREKALKNLKEAFENKQTIKVIVKDAVDAGLICIYNGVRVFIPASH
IELSHVDDLEAYKGLELEVNIIEFIKDRYRTKIVGSRRNILKTIRNKHIEETWNSLEKDT
VVEGEVKRFTDFGAFIEINGVDGLLHVSEISWGRVEKPEDALKIGDKIKVYILDIDKENK
KLALSIKKLIQDPWKSVEIKYPIGNIVLGKVVRFANFGAFIELEPGVDGLVHISKISNKR
IDKPEEELTLGKEVKAKILEVNSVEKRIALSIKDVEEF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattttagcagataaagcaggattttgctttggtgttaaaagggctttagat
acaacaataaataccaaagaaaatttaaagggtaaaatttatactttaggtcctttgata
cataataatgatgtggttaatcttttaaaagacaaaggtatagaacctataagtatacag
gatgtagataaacttaacaaagatgatactattattataagatctcatggagtaccactt
caaactataaactatttaaaagacaaagggttaaatgttataaatacaacctgccctcat
gtggccaatatacaaattaaagctaaaaaatattatgaagaaggttacaaaatagtaata
gttggagatgaaaatcatccagaggttattgggataaatggttggtgtaataattctgct
attatctcaaaggatggtgccaatataaataacttagataaaaaagtttgcgtattgtgt
caaaccacagaaaaacaagaaaattgggaaaaggtccttactatattaattaaaaactct
agagaaatattagcttttaatactatatgtaatgcaacacaagtgcgccaacaatctgca
aaaaaattatctgaaaaagtggatagcatgatagttataggtggtaaaaatagttctaat
actactaagctttatgaaatatgtaaaagtaattgcaaaaatacaatacatgttgaaaat
gcaaaggaaatacctgagcacatatataaaaactcaaatattataggcgttactgccgga
gcatctacaccagattggattataaaggaggctattaataaaatgaataataatgatagt
ataatagaagtatcaaaaaatgaaatgcttaactatatgaatgaaaaggagcaacaaata
gtagttggaaaagtagtaaaaggaactatagtttctttaaatgaaaatgagttatttgtt
gatttaagctataaatctgaaggcattatacctaaagaagaagtaactttagatgaagaa
tctatattaaaagaatcctttaaggtaggagatgaaatagaagccaaaatagttagaata
aaaaatgaagatggatacgtggtactatccttaaaggaattgcatcgtgaaaaagcctta
aaaaatttaaaagaagcctttgaaaataaacaaactataaaagttattgtaaaagatgcc
gttgatgctggattaatatgtatatataatggtgttagagtatttattccagcttctcat
atagaactttcccatgtagatgacttagaggcatataaaggcttagaattagaagttaat
atcattgaatttataaaagataggtatagaactaaaatagtaggttcaagaagaaacata
ttaaaaactattagaaataaacatatagaagaaacttggaactctttagaaaaagataca
gtagtagaaggagaagtaaagagattcacagactttggagcttttatagaaattaacgga
gtggatggtttactacatgtttcagaaatatcctggggaagagtagaaaagccagaagat
gcattaaaaataggagataaaataaaagtatatattttagatattgataaggaaaataaa
aaactagctttaagcataaaaaaattaatacaagatccttggaaaagtgtagagataaaa
tatccaataggaaatatagtattaggaaaagtagttagatttgcaaactttggagctttt
atagaattagaacctggtgtagatggcctagtgcatatatcaaaaataagcaataaaaga
atagataaaccagaagaagagttaactttaggaaaagaagtcaaagctaaaatactagaa
gttaattcagttgaaaaaagaattgcattaagtataaaagacgttgaagaattttaa
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