Clostridium botulinum A ATCC 3502: CBO3014
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Entry
CBO3014 CDS
T00533
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03030
DNA replication
cbo03410
Base excision repair
cbo03420
Nucleotide excision repair
cbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBO3014 (polA)
03410 Base excision repair
CBO3014 (polA)
03420 Nucleotide excision repair
CBO3014 (polA)
03440 Homologous recombination
CBO3014 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbo03032
]
CBO3014 (polA)
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO3014 (polA)
Enzymes [BR:
cbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBO3014 (polA)
DNA replication proteins [BR:
cbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CBO3014 (polA)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CBO3014 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBO3014 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
CAL84575
UniProt:
A5I693
LinkDB
All DBs
Position
complement(3204018..3206645)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEINPDYIVAAFD
RKAPTFRHEEYKDYKAGRKKMPEELAQQFPIVKELLSALAINIFEIDGFEADDLIGTLSV
FAEEKGIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMVEEFGVTPKEFIDV
KGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIETVLENIENIKGKKLKENLHEYREQAIF
SKKLATIICNVPIDMSLEDIKSKEEYDINKVREMFERLEFKSLMNKVGKSDEEETVEEEV
SYKNIVSLEEFKDLKNNIIKYKENDLYLYFELEDIVLFSKSRVKTLYANFKDEVYRIDFE
MLIKNTKEQFIEVCKEIFESKEIKKITYDAKNPRTILRKLGIEFNGIKFDINLAAYLIDP
VRKEYEISSLASEYLFKNINREDEFLKIKEVNIMPNLYKVLEEKIKEQDMEELLYKVEQP
LTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQLEIYSMSEEEFNINSPKQLGKILFE
KLDLPVIKKTKTGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKAAIDEDGK
IHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFIPNTGDSVILSADYSQIELRV
LAHISDDKNMISAFNEHDDIHTKTASEVFKVPIEEVTPLMRGNAKAVNFGIVYGIGDFSL
SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAIEKGYVSTILNRRRYIKEVKSSNK
IVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKLKEDNFKSSIILQVHDELILNVHKDEL
EKIKALVKKEMEQVLELKVGLDVDINIGNNWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaagattattaatattagatagtaatagtttattaaatagagctttttat
gcattacctgatcttatgactggagagggaattcatactaatgctatatatggttttgtt
aatatgcttttaaaaatgaaagaagagataaacccagattatatagttgcagcttttgat
agaaaggcacctacctttagacatgaagaatataaggactacaaagcaggtagaaaaaag
atgccagaggaacttgcacagcagtttcctatagtaaaagagcttttgtccgcattagcc
ataaatatattcgaaattgatgggtttgaagcagacgatctaataggaactttatctgta
tttgcagaggaaaaaggaatagaagtttacatagttacaggagataaagatgccctacaa
ttggctacagataatgtaaaagtagttataactaaaaagggtattacagaaaaagaaatt
tatgataaaaatagaatggtagaggagtttggagttactcctaaagaatttatagatgta
aaaggtcttatgggagacacatctgacaatatacctggagtacctggaataggtgaaaaa
actgcctttaagcttataaaagaatataaaagtatagaaacagtacttgaaaacatagag
aatataaaaggaaaaaaattaaaggaaaatttacatgaatatagagaacaggctatattt
agcaaaaaattagctactattatatgtaatgttcctatagatatgagtttagaagatata
aaatcaaaggaagaatatgatataaacaaagttagagaaatgtttgaaaggttagaattt
aagtctttaatgaataaagtaggtaaaagtgatgaggaagaaacggtagaagaggaagtt
tcttataaaaatatagtttctttagaagaatttaaagatctaaaaaataatataataaaa
tataaagaaaatgatttatatctgtattttgaattagaagatatagttttattttctaaa
tctagagtaaaaacattatatgctaattttaaagatgaagtttatagaatagactttgaa
atgcttataaaaaatactaaagaacaatttatagaagtatgtaaagaaatatttgaaagt
aaagaaattaaaaaaattacctatgatgcaaaaaatccaaggactatattaagaaagtta
ggaatagagtttaatggtataaaatttgatataaatttagctgcatatctaatagatcca
gtgaggaaagaatatgagatatctagtttagcttcagaatacttgtttaaaaatataaac
agagaagatgaatttttaaaaataaaagaagttaatataatgcctaatttatataaagtg
ctggaagaaaaaataaaagagcaagatatggaagaattgctatataaggtagaacaacct
cttacagaaacattatcagctatggagacagaaggttttaaagttgataaagatatactt
ttacagctagagaaaaaatttaaaggggaaatagaaagtactcagctagaaatatattca
atgtctgaagaagaatttaatataaattctcctaaacagttagggaaaatactctttgaa
aaattagatttacccgttataaagaaaacaaagacaggatattctactaacgcagaggta
ctggataaattaagagataaacatccaataatagataaaataacttattatagacagtta
acaaaaatatactctacttatatagaagggctaaaagctgctatagatgaggatggaaaa
atacattcaaattttaatcaaactgttacagctacaggaagattatctagtacagagcct
aatcttcaaaatatacctataaaatatgaaatgggaagagaaataagaaaggtatttatc
cctaatacaggggattctgtaatactttcagcggattattcacaaatagaattaagagta
ttagcacatatatctgatgataaaaatatgataagtgcctttaatgaacatgatgatatt
catactaaaactgcatcagaagtgtttaaagttccaatagaagaagtaacacctcttatg
agaggtaatgctaaagcagttaattttggtatagtttatggtataggagactttagctta
tctcaagatttaaatataactagaaaagaagcaaagcagtatatagatgcttatttggag
agatatcctaatgtaaaactttatttagaaaatatagtagaagaagctattgaaaaaggt
tatgtaagtactatattaaatagaagaagatacataaaagaggttaagtcctcaaataaa
atagttaaagctgcaggagaaaggctagctatgaatagtccaatacaaggaagtgcagcg
gatataataaaattagctatggtaaatgttcatagaaaattaaaagaagataattttaaa
agtagtataatattacaagtacatgatgaattaatattaaatgtccataaagatgaacta
gaaaaaatcaaagctttagtaaaaaaagaaatggaacaggttttagaattaaaagttggg
ttagacgtggatataaacataggtaataattggtatgaggcaaagtag
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