Clostridium botulinum A ATCC 3502: CBO3387
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Entry
CBO3387 CDS
T00533
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBO3387 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO3387 (uvrB)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBO3387 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBO3387 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_19
4HB_MCP_1
IFT46_B_C
SWI2_SNF2
AAA_5
Talin_middle
Motif
Other DBs
NCBI-ProteinID:
CAL84946
UniProt:
A5I7B2
LinkDB
All DBs
Position
complement(3627045..3629042)
Genome browser
AA seq
665 aa
AA seq
DB search
MNKMNQFKVISKFNPTGDQPKAIKSIAKGIEKREKFQTLIGVTGSGKTFTMANIIEKVQK
PTLVLAHNKTLAAQLCSEFREFFPNNAVEYFVSYYDYYQPEAYVAQSDTYIEKDASINDE
IDKLRHSATSALFERKDVIIVASVSCIYGLGNPEEYKKLTISLREGMEKDRDEIIKKLVE
IQYERNDIDFSRGTFRVKGDVLDIFPASSSSKAVRVEFFGDEIDRIKEFDVLTGETITKL
KHISIFPASHFATSKDRLEVAIKDIEEELEERVKELVSQDKILEAQRLKQRTNFDIEMMR
EVGYCTGIENYSRVLDGRAKGTPPQTLLDYFPQDFLLFIDESHVTLPQVKAMQAGDKSRK
DSLVEYGFRLPCAYDNRPLTFKEFENKLNQVVFVSATPAKYELEYSTNTAEQVIRPTGLL
DPEIIVKPVKGQIDDLYTSIQETIKRGFRILVTTLTKKMAEDLTDYLKEMGVKTRYLHSD
IDTIERMKIIHDLRKGEFHVLVGINLLREGLDIPEVALVTILDADKEGFLRSETSLIQTV
GRAARNSESKVIMYGDVITKSMEKTIKETNRRRKIQMEYNEEHGIVPKTIIKDIREVIQI
SDIAEERKEYDNLNEALKSYNNDIDKLIEKYEEEMKEAAQNLQFEKAAHLRDVIYKLKKD
KETEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatgaaccaatttaaggtaatttcaaaatttaatcctacaggagatcaacct
aaagctataaaatctattgctaaaggcatagaaaaaagagaaaaatttcaaactttaata
ggcgtgaccggatcaggtaaaacttttactatggcaaatattatagaaaaagttcaaaag
cctaccttagttttagctcataataaaacactggcagcacaattatgctcagaatttaga
gagttttttcctaataatgcagtagaatattttgtatcttattatgattattatcaacca
gaagcatacgtagctcaaagtgatacatatatagaaaaagatgcatctataaatgatgaa
atagataaattaaggcactcagccacatcagctttatttgaaagaaaagatgtaataatt
gttgcttctgtatcttgtatatatggacttggtaatccagaagagtataaaaagttaact
atatcgttaagagaaggtatggagaaggatagagatgaaataattaaaaaattagtagaa
atacaatatgaaagaaatgacatagatttttctagaggtacttttagagtaaaaggtgat
gttttagatatttttcctgcttcatctagtagcaaagcagtaagagtagaattttttggt
gacgaaatagatagaataaaagaatttgatgttttaacaggagaaactataactaagtta
aaacatatatctatattcccagcatctcactttgcaacttcaaaggatagactggaagtt
gctataaaagatatagaagaagagctagaagaaagagtaaaagaattagtatctcaggat
aaaatattagaggctcaaagattaaagcagagaactaattttgatatagaaatgatgaga
gaagttggatactgtacaggcattgaaaattattcaagagtgttagatggaagagcaaaa
ggaacaccacctcagacccttttagattattttccacaggattttcttctttttatagat
gaaagtcatgtaactttgccacaggtaaaagctatgcaggcaggagataaatctagaaaa
gattctttggtggaatatggattcaggttgccttgtgcctatgataataggcctcttacc
tttaaggaatttgaaaataaattaaatcaagtagtttttgtaagtgctacaccagcaaaa
tatgaattagaatattcaactaacacagcagagcaagtaataaggcctacaggactttta
gatcctgaaataattgtaaaaccagtaaagggacagatagacgacttatatactagcata
caagaaacaattaaaagaggatttagaattctagtaactacattaacaaaaaaaatggca
gaagacttgactgattatttaaaagaaatgggagtaaaaactagatatttacattcagat
atagatactatagaaagaatgaaaataatacatgatcttagaaaaggagaatttcatgtt
ttagtaggaataaacttactaagagaaggattggatataccagaagtagctttagttaca
atattagatgcagataaagagggatttttaagatcagaaacatctcttatacagactgtc
ggaagagcagcaagaaactctgaaagtaaggtaattatgtatggggatgttataaccaaa
tccatggaaaagactataaaagaaactaatagaagaagaaaaatacaaatggaatataat
gaagaacatggaattgttcctaaaactataataaaagatataagagaagtaattcaaata
agtgatatagcagaggaaagaaaagaatatgacaatttaaatgaagcattaaaatcttat
aataatgatatagataaattaatagagaaatatgaagaagaaatgaaagaggcagcacaa
aatttacagtttgaaaaagcggctcatttgagagatgtaatatacaaattaaaaaaagat
aaagaaacagaactttaa
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