Clostridium botulinum A ATCC 3502: CBO3534
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Entry
CBO3534 CDS
T00533
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cbo
Clostridium botulinum A ATCC 3502
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbo03032
]
CBO3534 (hup)
03036 Chromosome and associated proteins [BR:
cbo03036
]
CBO3534 (hup)
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO3534 (hup)
DNA replication proteins [BR:
cbo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBO3534 (hup)
Chromosome and associated proteins [BR:
cbo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CBO3534 (hup)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CBO3534 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Peptidase_C80
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CAL85094
UniProt:
A5I7Q9
LinkDB
All DBs
Position
complement(3776587..3776865)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKSELITSMAEKSKLTKKDAETALKAFIESVEEALEGGEKVQLVGFGTFETRERAERVG
RNPRTKEEITIPASIAPVFKAGKELKEKVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcagaattaattacaagcatggcagaaaaatcaaaattaactaaaaaggat
gcagaaacagctttaaaggcatttatagaaagtgttgaagaagcattagaaggtggagaa
aaagttcaattagttggctttggtacttttgaaactagggaaagagctgaaagagtaggt
agaaatccaagaactaaagaagaaataactatacctgcatcaatagcacctgttttcaaa
gcaggaaaagaactaaaagaaaaagtaaacaaaaaataa
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