Candidatus Viadribacter manganicus: ATE48_12370
Help
Entry
ATE48_12370 CDS
T04422
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbot
Candidatus Viadribacter manganicus
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbot03400
]
ATE48_12370
Enzymes [BR:
cbot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATE48_12370
DNA repair and recombination proteins [BR:
cbot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ATE48_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DUF2300
DEAD
AAA_16
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ANP46655
UniProt:
A0A1B1AJC9
LinkDB
All DBs
Position
2406685..2410074
Genome browser
AA seq
1129 aa
AA seq
DB search
MSAALDPVAEATNAQGEAAHPHVSVFVTANAGSGKTKVLVDRIARLLLEGSKPSAFLCIT
YTKAAAAEMQRRLFERLGGWCVADDVSLAAELEKLGAGGVDLARARALFAQALETPGGLK
IQTIHAFCERLLARFPLEAYVPPGFDIADEARSSALLADARAKAALSDGGEREAFRRFAK
RLYSDHLEGLLDRLALRRAEFHRFAKKYPGELFAASALRQRHGVTQTAEDYTRRFLSRWR
WDEFRRSAEALATSSTQDQSTATRLRGILACIDAKSDDTELLRACFAAAFTSGGAVYKKL
VTAKFGASQPWIEPQLKDFFDACEIARDDLNAIERAEDAVAALALALKLDEAYGEGKTRA
GVLDFDDLIEHAQNLLQSSEAAPWVLYKLDGGLDHILIDEGQDTSPAQWDLITPLQNEFF
AGAGARERNRTVFSVGDPKQSIYAFQGADPERFLGEAQNLSARVRAAEKKFSAPGLRTSF
RSSPEILAVVDEAMKNKPLIAGPGAHDKIVHLAARAAEPGAVEVWPVTPKPIISDAAPWD
APLDMERESSAHVVLAKAIAKRIKAMIEAREAVWDKGVRRPMRAGDVLALVRKRGAMFRE
LIKAFKREKLPVAGADRMVLRDELAVQDCLTLMQVALDPADELSLACVLKGPWCNLTSDD
DDIFPLAYDRGHDRLIDRLLASADPKYAHAQVFVQELVARRGADPFAFLSWALETPHNGA
PGWARIFARLGPETRDPIEELLQRALKLPHHVAPTLQRFLYDIELDAEQVKRELEAETGA
IRVMTVHGAKGLEAPIVILPDSTGDVGDAPDNGLLFDAEEGPFVSFSAKGDDAPCADARA
AHKERMLGEHWRLLYVAMTRARDRLIVCGPQWRNAEAPAVSWRAAVEEALGALGAEKIDT
PFGEGLRLGQVSIVDAQSAIVQAETVLPAWALMTAPGAQRVEIAAPSRLHRVDPALFSPR
GDGQKRFRRGRLIHGLLERLPEILPSNRDAAARAWLTRQGVEEAEAESFAREALTVINDP
RFAAVFSSASRAEAPIIGEVRGKAVRGVVDRLAVEHERVIVLDYKTDRPSPTDAAAAPDS
YVMQLALYREVLRKIFPAKIITCALLWTETPHLMELPDSRLDDVFATFA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcactcgatcccgtcgccgaagcaacgaacgcgcagggtgaagctgcgcat
ccgcacgtgtcggtcttcgtcaccgccaatgcaggctctggcaagaccaaagtgctggtg
gatcgcatcgcgcggcttctgcttgaaggctcgaagccgtcggcgttcctctgcatcacc
tacacgaaggcggccgcggccgagatgcagcgtcgtctgtttgagcgtttgggcggttgg
tgcgttgccgatgacgtcagtcttgcagccgagttggaaaaacttggtgctggcggggtc
gaccttgcgcgcgcgcgcgcattgttcgcgcaggcgctcgaaactcctggcggattgaaa
atccagaccatccacgcgttctgtgaacgtctgctcgcgcgttttccattggaggcttac
gtacctcctgggtttgacatcgccgatgaagcgcgttcgtcggccttgttggccgatgcg
cgcgccaaagcggcgctctctgacggcggcgagcgcgaggcctttcgccgcttcgccaag
cgcttgtacagcgaccatttggaaggcttgctagatcgccttgctttgcgtcgcgcggag
tttcatcgctttgcgaagaaataccctggcgaactctttgctgcgtcagctctgcgccaa
cgacatggcgtcacgcagacggctgaggactatacgcgccggtttctttcacgttggcgc
tgggatgagttccgtcgctccgccgaggcgctggcgacatcatccacgcaagatcaaagc
acagccacgcgacttcgtggcattctcgcgtgtatcgatgccaaatccgatgatacggag
ttgctgcgtgcgtgttttgcggcggccttcacctcaggtggcgccgtctacaaaaagctc
gtcacggcgaagtttggcgcgtcgcagccttggatcgagccgcaactcaaagacttcttc
gatgcgtgtgaaattgcgcgtgatgacttgaacgcgattgagcgtgccgaggacgccgtc
gcggcgctcgccctcgcgctcaagcttgatgaggcttatggcgagggtaagacgcgagcg
ggtgtgctcgatttcgatgacctcatcgaacatgcgcaaaatcttttgcagagttcagag
gccgcaccatgggtgctttacaagctcgatggcggtttagatcacattctgatcgatgaa
gggcaggacaccagccctgcccagtgggatctgatcacgccgcttcagaacgagttcttt
gccggcgccggcgcgcgcgaacgcaatcggaccgtgttttcagtcggtgatccaaagcag
agcatctacgcttttcaaggcgccgacccggagcgtttcctcggcgaagcgcaaaatttg
tcggcgcgcgtccgtgccgctgaaaagaagttctccgctccgggcctgcgcacgtcattc
cgttcgtcgccggagattctggccgtcgttgacgaagcgatgaagaataaaccgctgata
gcggggcccggcgcacatgacaaaatcgtgcacctcgcggcgcgcgctgccgagcctggt
gcggttgaggtgtggccggtgacacccaagccgattatcagcgacgcggcgccgtgggac
gcgccgctcgatatggagcgcgaaagcagcgctcatgtcgtgctcgcgaaggctatcgcc
aagcgcattaaggcaatgattgaggcgcgtgaggcggtgtgggacaaaggcgtgcgccgg
cccatgcgcgccggcgatgttttggcgctggtgcgtaagcgcggcgccatgttccgtgaa
ttgatcaaagcctttaagcgcgaaaaacttccggtcgccggcgcggatcgcatggtgctc
cgcgatgaacttgcggtgcaggattgccttacgcttatgcaagtggcgctcgatcctgcg
gatgagctctcgctggcgtgcgttctcaaaggtccttggtgcaacctcacgagcgacgac
gacgatatcttcccgctcgcatatgatcgcggccacgatcggttgattgatcggcttctg
gcgagcgcggacccaaagtacgcgcatgctcaggtctttgttcaggaacttgttgcgcgt
cgcggcgctgatccctttgcgttcctgagctgggcgttggagacgccgcacaacggcgcg
cccggatgggcgagaatcttcgcgcgtctcgggccggagacgcgcgatccgattgaagaa
ctgctgcaacgtgcgctgaagctgccccaccatgtcgctccgacgttgcagcgctttctc
tacgatatcgaactcgacgccgagcaggtgaagcgcgagctcgaagcagagacaggcgcc
atccgggtcatgaccgtgcacggcgccaagggtctcgaggcgccaatcgtcattttgccg
gattcgaccggtgatgtcggtgatgcgcccgacaatggcttgctgttcgatgctgaagag
gggcccttcgtctcattcagcgccaagggtgatgacgcgccatgcgctgatgcgcgcgcc
gcgcacaaagagcggatgctgggtgagcattggcgcttgctttatgtcgccatgacgcgc
gctcgcgatcggctgatcgtgtgtggcccgcaatggcgaaatgccgaagcgccggctgtg
agctggcgcgccgctgtcgaggaagcgttgggggctctaggcgcagagaagatcgacacg
ccgttcggcgaggggctgcggttgggacaagtaagcatcgtggatgcgcaaagcgcgatc
gtgcaggctgaaacggtgttgcctgcctgggcgctgatgaccgcgccgggcgcacagcgt
gttgagatcgccgcgccgtcgcggctccatcgtgtggatccggcgcttttctcgccgcgc
ggagatggtcagaagcgattccgtcgtggccgtctcatccacggattgctggagcgcttg
cccgagattttgccgtcgaaccgcgatgcggccgcgcgtgcgtggctgacgcggcagggt
gtcgaggaagcggaggccgagagcttcgcgcgcgaggctctcaccgtcatcaatgatccg
cgctttgccgcggtcttctcatccgccagtcgcgccgaggcgccgatcattggcgaagtg
cgcggcaaggctgtgcgaggggtcgttgaccgcctcgccgttgaacacgaacgcgtcatc
gtgctcgactacaaaaccgatcgcccgtcaccaaccgatgccgcagcggcgcccgattct
tacgtcatgcagttggcgctgtatcgcgaggttctgcgcaagatattcccagctaagatc
atcacttgtgcgctgctgtggacggaaacgccccatctgatggagctgcctgatagccgt
ctggatgatgttttcgctacgttcgcgtga
DBGET
integrated database retrieval system
