KEGG   Caenorhabditis briggsae: CBG12805Help
Entry
CBG12805          CDS       T01054                                 

Gene name
Cbr-sdha-2
Definition
(RefSeq) C. briggsae CBR-SDHA-2 protein
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
cbr  Caenorhabditis briggsae
Pathway
cbr00020  Citrate cycle (TCA cycle)
cbr00190  Oxidative phosphorylation
cbr01100  Metabolic pathways
cbr01200  Carbon metabolism
Module
cbr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cbr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cbr_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CBG12805 (Cbr-sdha-2)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CBG12805 (Cbr-sdha-2)
Enzymes [BR:cbr01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     CBG12805 (Cbr-sdha-2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 Pyr_redox_2 GIDA FAD_binding_3 HI0933_like DAO AATF-Che1
Motif
Other DBs
NCBI-GeneID: 8582275
NCBI-ProteinID: XP_002640279
WormBase: CBG12805
UniProt: A8XFN0
LinkDB All DBs
Position
I
AA seq 640 aa AA seqDB search
MLNVVKSMSRTKTPVRTYMKKQVSATTNFDVIDHEFDAVVVGAGGAGLRAAMGLSEGGMK
TAVITKLFPTRSHTVAAQGGVNAALGNMNPDNWRWHFYDTVKGSDWLGDQDAIHYMTREA
ERAIIELENYGMPFSRTTDGKIYQRAFGGQSNDFGRGGQAHRTCCVADRTGHSLLHTLYG
ASLQYDCNYFVEYFALDLIMDKGQCIGVIALDIETGQIHRFRAKSTVLATGGYGRAYFSC
TSAHTCTGDGTALTARAGIRNSDMEFVQFHPTGIYGVGCLITEGSRGEGGYLVNSQGERF
MERYAPVAKDLASRDVVSRAMTMEIIEGRGVGPNKDHIYLQLHHLPAEQLQQRLPGISET
AQIFAGVDVTKEPIPVIPTVHYNMGGVPTNYKGQVLNYTPENGDQVIPGLYAAGECAAHS
VHGANRLGANSLLDLVIFGRSCALNILKENKPGDLIPDLPANCEEKSRDNLNGLLHSKGD
IPAIDLRLKMQHTMQKHAAVFRRGDLLKEGVEKMASIYKEQQHMKACADSGKMWNSELVE
TLELQNLLINANQTIVAAENRTESRGAHARDDFQDRIDEFDYSKSLEGQKKKTFEEHWRK
HSIIGIDTKTGAVDLTYRPVIDTTLDKSETDWVPPKVRSY
NT seq 1923 nt NT seq  +upstreamnt  +downstreamnt
atgctgaacgtcgtcaagtcgatgtcccgtacgaaaacgccggttcgcacctatatgaag
aagcaggtgagcgccactacaaacttcgatgtcatcgatcatgagttcgacgctgtcgtc
gttggtgctggtggagccggattgagagcagcgatgggattgtcagagggtggaatgaaa
actgcagttatcactaagctgtttccaaccagatcgcacacagttgcagctcaaggaggt
gtgaatgccgctttgggaaacatgaatcctgataactggcgctggcatttttacgatact
gtcaagggttccgattggcttggagaccaagatgccatccattacatgactcgtgaagcg
gagagagctattattgagcttgaaaactacggaatgccattctctcgtaccaccgatgga
aaaatctaccaacgcgctttcggagggcaatccaatgatttcggtcgtggaggacaagcg
caccgcacttgttgtgttgcggatagaactggacattccctacttcacaccctatacgga
gcatctctccagtatgattgcaactacttcgttgaatatttcgctcttgatttgattatg
gacaagggtcaatgcatcggtgtgattgctttggacatcgaaactggtcaaattcatcgt
ttccgtgcaaagagcacggttcttgccaccggtggatacggaagagcctacttctcctgt
acctcagctcacacttgcactggagacggtacagcgttgactgctcgcgctggaatccga
aattccgacatggaatttgttcagttccatccaactggaatctacggagtcggatgtttg
atcactgaaggatctcgtggagaaggaggatatcttgtgaactcccaaggagaacgattc
atggagagatatgcaccagttgcaaaggatttggcgtcgagagatgttgtatcaagagcc
atgaccatggaaatcatcgagggacgaggagttggaccaaacaaggatcacatatacctt
cagttgcaccatcttccagctgaacaacttcaacagagattgccaggaatttcagaaact
gctcaaatctttgctggagttgatgtcaccaaagaaccaatcccagtcattccaacagtg
cattataatatgggaggagtccccaccaactacaagggacaagttctcaactacactccg
gaaaatggtgatcaagttatccctggactctatgcggccggagagtgcgcggctcactcc
gttcacggagcaaatcgccttggcgccaactcacttctcgacttggtcatctttgggaga
tcctgcgcattgaacatcttgaaagagaacaagccaggagacttgatcccagatcttcca
gcaaattgcgaagaaaaatctcgtgacaacttaaacggacttctccactcgaagggtgat
attccagccattgacttgcggctgaagatgcaacacaccatgcagaagcatgcagctgtt
ttcagacgtggagatttgttgaaggaaggagttgagaagatggcgtctatctacaaggag
caacagcacatgaaggcgtgcgcagattcaggcaaaatgtggaattcggaacttgttgag
actctcgagctccagaacttgctcatcaatgccaaccaaacgattgtcgccgctgaaaac
cgcacagaatcccgcggagcacacgctcgagatgacttccaggatagaatcgacgagttc
gactacagcaagtcgttggaaggacagaagaagaagacgttcgaggagcactggcgcaag
cattcaatcattggaatcgataccaaaacaggagcagtggatctcacttatcgtccagtc
atcgataccactctcgataaatctgaaactgactgggtgccaccgaaagttagatcctat
taa

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