Citrobacter braakii: A6J81_20535
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Entry
A6J81_20535 CDS
T04825
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K05880
transcriptional activator for dhaKLM operon
Organism
cbra
Citrobacter braakii
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbra03000
]
A6J81_20535
Transcription factors [BR:
cbra03000
]
Prokaryotic type
Other transcription factors
Others
A6J81_20535
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
GAF
AAA_2
PAS_4
AAA_5
PAS_8
AAA_16
HTH_50
AAA_7
Xre-like-HTH
AAA
HTH_17
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ARC42909
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All DBs
Position
4198287..4200212
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AA seq
641 aa
AA seq
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MTAHTHSIGKEVSSVIAQSWHRCSKFMQRETWQAPHQAQGLTFESICRRKTALLTIAQAA
LEDAWEFMDGRPCALLILDESACILSRCGDPQTVEQLAELGFRDGSYCAESIIGSCALSL
ATMPGQPTKTSGDQHFKQALHPWSFCSTPVFDNHGRLFGSISLCCLVEHECVSDLSLTLA
IAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDA
QASQGKNIHDLLNLPMLLRRAIKHARGLNHVEVTFESQHQFVDAVITLKPIVEEQGNSFI
LLLHPVEQMRQLMTSQLGKVSHTFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVG
KELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENGRLSRLELANGGTL
FLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQ
LYYALHSFEIVIPPLRARRNSIPSLIYTRLNSLKKRFSSSLKIDDDALAQLVAYSWPGND
FELNSIIENIAISSDNGHIRLSNLPDYLFAERPGLETASSLLPASLTFTAIEKEAIIHAA
RVTSGRVQEMSQLLNIGRTTLWRKMKQYDIDASQFKRKHLE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcacacgcatagcatcgggaaggaagtctcttcggtcattgcccagtcatgg
catcgttgcagcaagtttatgcagcgggaaacctggcaggcgccgcatcaggcgcaaggg
ctgacctttgagtcgatttgtcgtcgcaagacggcgctgctgacgattgcccaggccgcg
ctggaagatgcctgggagtttatggatggccgtccgtgcgcgctgctgattctggatgag
tcagcctgtattctcagccgttgcggcgatccgcagacggttgaacagctggcggagctt
gggtttcgcgacggcagttactgtgccgaaagcattattggcagctgtgcgctttctctg
gcgacgatgccggggcagccgacaaaaacttctggcgatcagcactttaaacaggcgctg
catccctggtcgttctgctcgacgccggtcttcgataaccatggtcgactgttcggctcc
atctcgctgtgctgtctggtggaacatgagtgcgtttctgatttatccctgacgctggcg
attgccagagaagtcggcaactctttgctgaccgacagcctgctggctgaatctaatcga
catttgaaccagatgtacggcctgctggagagcatggatgatggcgtaatggcctggaac
gaacagggcgttttgcagttcctcaatgcgcgcgcggcgctgcttttgcatcttgacgcg
caggccagtcaggggaaaaacattcacgacctgctcaatctacccatgctgctgcgccgg
gcgatcaaacatgcccgcggtctgaaccacgttgaagtcacttttgaaagccagcatcaa
tttgttgatgccgtcattaccctgaaaccgattgttgaggagcagggcaacagctttatc
ctgctgctgcatccggtggagcaaatgcgccagttgatgaccagccagctcggcaaggtg
agccatacctttgagcagatgtcgacagacgatcctgaaacccgccgcttgatccatttt
gggcgccaggcggcgagaggaagtttcccgatcctgctgtgtggagaagagggtgttggt
aaagagctgctgagtcaggctattcacaacgaaagcgagcgtgccagcggaccatatatt
gccgtgaactgtcagttgtatgccaacagcgtgctggggcaggattttatgggcagcgcg
cccaccgatgatgaaaacggtcggctgagccgtcttgaactggcgaacggcggcacgctg
tttctggaaaaaattgaatatctggcgccggagctgcaatccgcgttgttacaggtgatt
aagcagggggtactcacccgcctggatgcccgccggctgatcccggtggatgtcaaagtg
atcgccaccaccacggttgatctcgccaatctggtggagcagaaccgctttagccgccag
ctgtattatgcgctgcactcttttgagatagtgatcccaccgctgcgggcgcggcgtaac
agtattccctcgctgatttatacgcggctgaacagcctgaaaaaacgcttttcatccagt
ctgaagatcgacgacgacgcgctggcacagctggtggcctattcctggccgggcaatgac
tttgaattgaacagtattatcgaaaacatcgccatcagcagtgataacggccatattcgg
ctgagcaatctaccggattatctgtttgccgaacgtccgggtctggagacggcgtcttca
ctgctgcctgccagcctgacgtttaccgctatcgaaaaagaggcgattatccatgccgct
cgcgtcaccagtgggcgtgtgcaggagatgtcgcagctgctgaacattggtcgcaccacc
ctgtggcgcaagatgaagcaatacgacattgatgccagccagtttaagcgcaaacatctg
gagtag
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