KEGG   Clostridium botulinum E3: CLH_1287
Entry
CLH_1287          CDS       T00767                                 
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
cbt  Clostridium botulinum E3
Pathway
cbt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLH_1287 (dbpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbt03019]
    CLH_1287 (dbpA)
   03009 Ribosome biogenesis [BR:cbt03009]
    CLH_1287 (dbpA)
Enzymes [BR:cbt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     CLH_1287 (dbpA)
Messenger RNA biogenesis [BR:cbt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CLH_1287 (dbpA)
Ribosome biogenesis [BR:cbt03009]
 Prokaryotic type
  rRNA helicases
   CLH_1287 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_19 AAA_30 UTP25 Helicase_C_2 SWI2_SNF2
Other DBs
NCBI-ProteinID: ACD51293
LinkDB
Position
1364496..1365938
AA seq 480 aa
MSKEFNKFELSGELLKAIDNLGYKTPSEVQEKAIPEILRNKDLVVKSQTGSGKTASFGIP
LCEKIDWDENKPQVLVLAPTRELAVQISEDISNIGRYKRINCVPIFGKQSIMDQERKLKQ
KTHIVVGTPGRVLDHIDRGSLDVSKINYFVIDEADEMLNMGFIKQVEAIIRRIPKKRVTL
LFSATIPDEIKNLCDKHMNRPIDIAIKSQNLTSDNVSHYAYHVGYNQKLDLLNNILISEM
PETSVVFCRTKENVDTVHEYLNKKGYSTNKIHGGMMQKDRLDTMEQFRRGDFRILVATDI
ASRGIDIEGITHVINYDIPVEKEAYVHRIGRTGRAGAKGVALTFCKDSGDRYLNEIEEYI
GFKLEVKDLPSKEDIIKSTEKAMEVLKSKPKKKKEKSNAVNKDIMKIYLNGGKKKKIRAG
DIVGAVTKIPGVTGEDIGIIDVQDLASYVDILNGKGKTVINGLKTATIKGKKLKCDRARG
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgagcaaagaatttaataaatttgaattaagtggtgaattgctaaaagcaatagataat
ttaggatataagactccatcagaggttcaagagaaagcaataccagaaatacttagaaat
aaagatttagttgtaaaatctcaaacaggaagtggaaagactgcatcttttggtattcca
ttatgtgaaaaaatagactgggatgaaaataaaccccaagtgttagtattagcaccaaca
agagaattagcagttcaaattagtgaagatatatctaatataggaagatataaaagaatt
aattgtgtacctatctttggaaagcaatcaataatggatcaagaaagaaaattaaagcaa
aaaacacatatagttgttggtactccaggcagagtattagatcatatagatagaggaagc
cttgatgtgtcaaagataaactattttgttatagatgaagcagatgaaatgcttaatatg
ggatttataaaacaagtagaagctataataagaagaataccaaagaaaagagtaacatta
ttattttctgcaactatacctgatgaaataaaaaacttatgtgacaaacatatgaataga
ccaattgatatagcaattaaatctcaaaatttaacaagcgataatgtgagtcactatgct
taccatgtaggatataatcaaaaactagatctattaaataatatacttatatctgaaatg
ccagaaacttcagttgtattttgtagaacaaaagaaaatgttgatacagtacatgaatat
ttaaataaaaagggctattcaactaataagatacatggtggaatgatgcaaaaagacaga
cttgatactatggagcaatttagaagaggtgactttagaattttagtggcaacagatata
gcttcaagaggtatagatatagagggaattactcatgttataaactatgatattccagtt
gaaaaagaagcatatgtacatagaataggaagaacaggacgtgcaggagctaaaggagta
gctttaactttttgcaaagattctggagacagatatttaaatgaaattgaagaatacata
ggttttaaactagaagttaaagatcttccaagcaaagaagacataattaaaagcacagaa
aaagcaatggaagtattaaaaagtaaaccaaagaagaagaaggaaaagagtaatgccgta
aataaagatataatgaagatatatctaaatggtggtaagaaaaagaaaattcgtgcaggg
gatatagttggagcagtaactaaaataccaggagtaactggtgaagatattggaataata
gatgttcaagatttagcttcatatgtagatatattaaatggaaaaggtaagactgtaata
aatggactaaagacagctacgattaaaggtaaaaagcttaaatgtgatagagcaagaggt
taa

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