Clostridium botulinum E3: CLH_3393
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Entry
CLH_3393 CDS
T00767
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cbt
Clostridium botulinum E3
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbt03016
]
CLH_3393 (gidA)
03036 Chromosome and associated proteins [BR:
cbt03036
]
CLH_3393 (gidA)
Transfer RNA biogenesis [BR:
cbt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CLH_3393 (gidA)
Prokaryotic type
CLH_3393 (gidA)
Chromosome and associated proteins [BR:
cbt03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CLH_3393 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
DAO
Pyr_redox_3
IFT57
AlaDh_PNT_C
Pyr_redox
ThiF
Thi4
Lycopene_cycl
P4Ha_N
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
ACD51549
LinkDB
All DBs
Position
complement(3653409..3655289)
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AA seq
626 aa
AA seq
DB search
MKYNYEAGEVDVVVVGAGHAGCEAALASARMGLNTLICTINLDSIAMMPCNPNIGGTAKG
HLVREIDALGGEMGVNIDHTFIQSRMLNTSKGPAVHSLRAQADKKDYQFRMKRVLEEQEN
LQIRQIEVTELLVEGNKVTGIITRNGAIFRAKAVILATGTYLKGKIIIGEVSYSGGPNGL
FPANDLSQSLLDLGISLRRFKTGTPARINRRSVDFSKMIEQPGDDKIVPFSFMSKNIDKE
QISCYLTYTNEQTHNVIKDNIGRSPIYNGSIKGVGPRYCPSIEDKVMRFPDKLQHQIFVE
PEGLDTLEMYVGGMSSSLPEEVQLKMMRTLPGLENVEIMRTAYAIEYDSVDPTELEPTLE
FKNVEGLYGAGQFNGSSGYEEAGAQGLVAGINAALKIKGEEPMILTRSDAYIGVLIDDLV
TKGTNEPYRMMTSRAEYRLILRQDNADFRLTEIGKKVGLVTAERYETFLNRKNTIENELE
RLKKLQITNKRETNEFLLAVGSAELKKPISFYELIKRPEVDYFSLKNLDTEREELSEDIG
EQINIIAKYEGYISNQLEQVAQFRKFEKKLLPKDIDYSNVKGLRTEAEQKLNSIKPISIG
QASRISGVSPADISVLLIYLEHYYNK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataattatgaagcaggggaagttgatgtagtagttgttggtgctgggcatgca
ggatgtgaagcagcattagcatctgctagaatgggattaaatactttaatttgtactata
aatttagattcaatagctatgatgccatgtaatcctaatatagggggaacagctaaaggt
catttagtgagagaaattgatgcattaggtggagaaatgggtgttaatatagatcataca
ttcattcaatcaagaatgttaaacacatctaaaggaccagcagttcattcattaagagct
caagctgataaaaaggactatcaatttagaatgaagagagtattagaagaacaagaaaat
cttcaaataagacaaattgaggttactgagcttttagttgaaggcaataaagtaacaggc
attatcactagaaatggagcgatttttagagctaaagctgtaattttagctacaggtaca
tatttaaaaggaaagataataataggggaagttagttattcaggaggtccaaatggatta
ttcccagctaatgatttgtcacaatctttattagatttagggatttcattaagaagattt
aagacaggaactccagcaagaattaatagaagatctgtagatttttctaaaatgattgaa
caaccaggtgatgataagattgtacctttttcatttatgagtaaaaacatagacaaagaa
caaatatcatgttatttaacatatactaatgagcaaactcataatgtaattaaagataat
ataggacgatctccaatatataatggaagtatcaagggggtaggtcctagatactgtcca
tcaattgaagataaagtaatgagatttcctgataaattacaacatcaaatatttgttgag
ccagaaggtctagacactttagaaatgtatgtagggggaatgtcatcatctttaccagaa
gaagttcaattaaaaatgatgagaacattacctggattagaaaatgtagaaataatgaga
actgcatatgcaattgaatatgactctgtagatcctactgaattagaaccaacattagaa
tttaaaaatgttgaaggtttatatggtgctggtcaatttaatggtagttcaggatatgaa
gaggcaggagcacaaggtctagtagcaggtataaatgctgcattaaagattaaaggtgaa
gagcctatgatattaactagatcagatgcatatatcggagttcttatagatgatttagtt
actaagggtactaatgaaccatatagaatgatgacatctagagctgagtatagattaatt
ttaagacaagataatgcagactttagattaactgagataggaaaaaaagtaggattagtt
acagcggaaagatatgaaactttcttaaatagaaaaaatacaattgaaaatgaattagaa
agattaaaaaaattacaaataactaataaaagagagacaaatgaatttttattagcagta
ggatcagctgaactaaaaaaacctataagtttttatgaattaataaaaagaccagaagtt
gattattttagcttaaagaatttggatacagaaagagaagaactttctgaagatattggt
gaacaaataaacataattgctaaatatgaaggttatataagtaatcaacttgaacaagta
gctcaatttagaaaatttgagaagaaactattacctaaggatatagactatagcaatgta
aaaggattaagaacagaagctgaacaaaaattaaatagtataaaacctataagcataggt
caggcatcacgtatttcaggggtatctccagcagatatatctgtattacttatttatctt
gaacattactataataaataa
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