Cupriavidus basilensis: RR42_m1481
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Entry
RR42_m1481 CDS
T03642
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cbw
Cupriavidus basilensis
Pathway
cbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RR42_m1481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbw03400
]
RR42_m1481
Enzymes [BR:
cbw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RR42_m1481
DNA repair and recombination proteins [BR:
cbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RR42_m1481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AJG18880
UniProt:
A0A0C4Y774
LinkDB
All DBs
Position
main:complement(1561654..1562451)
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AA seq
265 aa
AA seq
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MRIATWNVNSLKVRLPQVLDWLSEQEKADTPIDALCLQELKMPDDKYPLAELESAGWHSV
FTGQKTYNGVAILARNATMATPTDVVRNIPGFDDPQQRVVAATYGDVRLVCAYFPNGQAP
DSDKFTYKLGWLQAITAWLREEMVKYPKLALLGDFNIAPEDRDVHDPKKWEGQNLVSPPE
RDAFRALEALGLTDAYRMFEQPEKSFSWWDYRMFAFRRNAGLRIDHILLSPALREACSAC
VIDRVPRTWEQPSDHTPVVATLDLG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgcgacttggaacgtcaactcgctcaaggtccggctaccgcaggtactggac
tggttgagcgagcaggaaaaggccgatacgccgatcgatgccctgtgcctgcaggagctg
aagatgccggacgacaagtacccgctggccgaactggaaagcgcgggctggcatagcgtg
ttcaccggccagaagacgtacaacggcgtggcgatcctggcgcgcaatgccaccatggcg
acacccaccgacgtggtgcgcaatatccctggcttcgacgacccccagcagcgcgtggtg
gcggcgacctatggcgacgtgcgcctggtgtgcgcgtacttccccaacgggcaggcaccg
gactccgacaagttcacctacaagctcggctggctgcaggcgatcaccgcgtggctgcgg
gaggaaatggtgaagtacccgaagctcgcgctgctgggcgacttcaatatcgcgcccgag
gaccgggatgtgcacgaccccaagaaatgggaggggcagaacctggtgtcgccaccggag
cgcgatgcgttccgggcgctggaggcacttgggctgaccgacgcgtaccgcatgttcgag
cagccggagaagagcttctcctggtgggactaccgcatgtttgcgttccgccgcaacgcc
ggcctgcgcatcgaccacatcctgctgtcgccggccctgcgcgaggcgtgcagcgcctgc
gtgatcgatcgcgtgccgcgcacctgggagcagccctcggaccacacgccggtggtggcc
acgctcgacctgggctga
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