Candidatus Symbiobacter mobilis: Cenrod_1524
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Entry
Cenrod_1524 CDS
T02877
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cbx
Candidatus Symbiobacter mobilis
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_1524 (phrB)
Enzymes [BR:
cbx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Cenrod_1524 (phrB)
DNA repair and recombination proteins [BR:
cbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Cenrod_1524 (phrB)
Prokaryotic type
Cenrod_1524 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGX87609
UniProt:
U5NBQ1
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All DBs
Position
1680645..1682174
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AA seq
509 aa
AA seq
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MRAPPHNPALSCLCLGFAMDVPYELGLVWFRRDLRLDDNAALALALRSCRRVHCAFLFDR
DILDSLPRQDRRVEFLVLCVRELDEALRNEGAHPGCGLIVLHGRAQAELVTLALDLGVQA
VFAAHDDESTSIERDTQVREALLPHGIALHTCKDHTIFERQEILTQSGSPYTVFTPYRKA
WFARLGATDCAAHDTRSLPHALAQRPAQYQRPVPTLEELGFAHTNLGSLPIPVGMSGAQR
LLDDFLTRIDRYADTRDFPAIKGPSYLGVHLRFGTISIRTLVRIAWPLHLAGNASATTWI
SELVWRDFYFSILANFPHVTSGASFKPAYDAIAWEQGPQAEARFAAWCAGQTGYPLVDAA
MAQLAQTGYMHNRLRMVAGSFLVKDLGIDWRWGERFFATHLNDFDLAANNGGWQWVSSSG
CDAQPFFRIFHPVTQSEKFDAQGKFIRRYLPQLARLPDRWIHAPWRASPLELDAAGVVLG
GNYPLPIVDHDAARRATLARYAVTKAVNG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctcccccgcacaatccggcgctttcttgcctttgccttgggtttgccatggat
gttccttacgagctgggtctggtgtggttccggcgtgatttgcgtctcgacgacaacgct
gcgttggcgctggcgctgcgctcgtgtcggcgcgtgcattgcgcctttctcttcgaccgt
gacatcctcgactccctgccccggcaagatcggcgcgtcgagttcctcgtgctgtgcgtg
cgcgaactggacgaagcgctacgcaacgagggcgcgcaccccggctgtggcctgatcgtg
ctgcatggccgtgcgcaagcagagctggtcacgctggcgctggacttgggcgtgcaagcc
gtctttgccgcgcatgacgacgagtccaccagcatcgaacgcgatacacaggtgcgcgag
gcactgctcccccacggcatagccttgcacacgtgcaaggaccacaccatcttcgaacga
caggagatcctcacccaatcgggatcgccgtacaccgtcttcaccccctaccgcaaggcg
tggttcgctcgcctgggtgctacggactgcgcagcgcacgacacccgcagcctgccccat
gccctggcgcagcgccccgcgcaataccagcggcccgtccccacgctcgaagaactggga
ttcgcgcacaccaacctcggctcgctgcctatccctgtgggcatgtccggcgcacagcgg
ttgctcgacgatttcctgacccgcatcgaccgctacgccgatacccgggactttcccgcc
atcaaaggccccagctacctcggggtgcatctgcgtttcgggacgatctcgatccgtacc
ctggtgcgcatcgcgtggccactgcacttggctggcaatgcctcggcaacgacatggatc
agcgaactggtctggagggatttctatttctcgatcctggcgaactttcctcacgtcacc
agcggcgcatcgttcaaacctgcctacgacgccatcgcctgggaacaaggcccccaagcc
gaagcacgctttgccgcatggtgcgcggggcagacggggtatcccctggtcgatgccgcg
atggcgcaactcgcacagacggggtacatgcacaaccgcctgcggatggtcgccgggagc
ttccttgtcaaggatctgggcatcgactggcgctggggagagcggttctttgccacgcac
ctcaacgacttcgacctggccgccaacaacggcgggtggcagtgggtcagttccagcggc
tgcgatgcgcagccctttttccgcatcttccaccccgtcacgcagagcgagaaattcgac
gcccaaggcaagttcatccgccgctacctgccgcaactggcccgattgccggaccgatgg
atccacgccccttggcgcgccagccccctggagctggatgccgccggagtggtgctaggg
ggcaattaccccttgccaatcgtcgaccacgacgccgcacgccgtgccaccctggcgcgg
tacgcagtgaccaaagccgtcaacgggtag
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