Clostridium botulinum A2: CLM_2708
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Entry
CLM_2708 CDS
T00883
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cby
Clostridium botulinum A2
Brite
KEGG Orthology (KO) [BR:
cby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cby03016
]
CLM_2708 (truB)
Enzymes [BR:
cby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLM_2708 (truB)
Transfer RNA biogenesis [BR:
cby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLM_2708 (truB)
Prokaryotic type
CLM_2708 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACO83840
UniProt:
C1FS56
LinkDB
All DBs
Position
complement(2720788..2721657)
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AA seq
289 aa
AA seq
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MDGVINVLKPKGITSFDVVRHIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIM
EGTKTYRVEMKLGTTTDTYDREGTVLEEKEIDLTPIEVEETIKKYIGDIDQVPPMYSALK
INGQKLYYLARKGIEVEREARKIHIYDICILSIDLPYVIFDVKCSKGTYIRSLCFDIGKD
LDSGAVMWNLQRLEASPFNIKEAIKLEDLNEENIKQYITPIDEALKDYEKLSLDKKFEKL
VLNGVILKDRRVLDNIEENKLYRTYIEDDNFIGLGMKNAYGFKIHKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaataaatgttttaaaaccaaaggggataacatcctttgatgtagttaga
cacataagaaaaatagcgaaaataaaaaaagtcggtcatacaggtacattagatccctta
gcttctggtgttctccctgtatgtataggtaaggctaccaaaatagttgattatataatg
gaaggaactaaaacctacagagtagaaatgaaacttggaactaccacagacacttatgat
agagaaggtactgtattagaggaaaaagaaatagatctaactcctatagaggtagaagag
actattaaaaaatatataggagacatagatcaagtacctcctatgtattctgccttaaaa
attaatggacaaaaactttattacttggccagaaaaggtatagaagtagaaagagaagca
agaaaaatacatatatatgatatatgtattttaagtatagatttgccctatgttatattt
gatgttaagtgttcaaagggaacttatataagaagtttgtgttttgatataggaaaggat
ttagattctggagcagtaatgtggaatctacaaagattagaagcaagcccctttaatata
aaagaagcaataaaattagaagatttaaatgaggaaaatataaaacagtatataacacct
atagatgaagctttaaaggattatgaaaaattatctttagataaaaaatttgaaaaactt
gtactaaatggtgtaatattaaaagatagaagagttttagataatatagaagaaaacaaa
ctatatagaacttatatagaagatgataattttataggattaggaatgaaaaatgcatat
ggatttaaaattcataaattattaacttag
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