Chlamydia caviae: CCA_00762
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Entry
CCA_00762 CDS
T00125
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cca
Chlamydia caviae
Pathway
cca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCA_00762 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cca03019
]
CCA_00762 (pnpA)
03016 Transfer RNA biogenesis [BR:
cca03016
]
CCA_00762 (pnpA)
Enzymes [BR:
cca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCA_00762 (pnpA)
Messenger RNA biogenesis [BR:
cca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCA_00762 (pnpA)
Transfer RNA biogenesis [BR:
cca03016
]
Prokaryotic type
tRNA degradation factors
CCA_00762 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
REC1
Motif
Other DBs
NCBI-ProteinID:
AAP05503
UniProt:
Q822C1
LinkDB
All DBs
Position
868515..870599
Genome browser
AA seq
694 aa
AA seq
DB search
MTFETIFVTLEEGKTLVFETGKIARQANGAVLARMQETWVFSSVCAANLEEPVDFLPLRV
DYQEKFSSIGKTLGGFIKREGRPTEREILTSRLIDRSMRPSLPNRLMQDVQVLSYVWSYD
GVTLPDPIAICGVSAALAISDIPQISVVAGVRVGFVNNSWVVNPTKAEMDVSRMELVLAG
TENAILMIEGHCDFLTEEQVIEAIEFGHKHIATICRAIKDLQQKVGKKKNSDAIVPLPEE
VQSSVNTFVEGKFADLLKIKEKKAFEAASKQLEKEIVEKFLEENEIFTALNIKTAFKQAK
SDYMRALIREQSVRSDGRAITTIRPISIDTSFLPRTHGSCLFTRGETQTVAVCTLGSEAM
AQRYEDLNGEGLAKFYLQYFFPPFSVGEVGRIGSPGRREIGHGKLAEKALSHTLPDPAKF
PYTIRIESNITESNGSSSMASVCGGCLALMDAGVPIKTPIAGIAMGLILDNDHVTILSDI
SGLEDYLGDMDFKVAGNTEGITAFQMDIKVEGITPTIMQAALAQAKAGRQHILDIMKEAL
AAPKTDLSQYAPRIETMQIKPNKIATVIGPGGKQIRQIIEEAGVQIDINDSGLVSISASS
PQAIEKAKSMIEGLVGEVEVGKIYEGRVTSIVPFGAFVEILPGKEGLCHISEFSKQRIEN
VGDFVKQGDILAVKLLSINEKGQYKLSHKATLSE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaactattttcgttaccctcgaagaaggcaaaacattagtatttgaaacg
gggaaaattgctcgccaagctaacggagctgttcttgctcgcatgcaagaaacttgggtc
ttttcatctgtttgtgcggccaatctcgaagaacctgtagactttctccctttaagagtc
gattatcaagaaaagttttcctctataggaaaaactttaggcgggttcattaaaagagaa
ggtcgcccaactgaaagagaaattttaacttctcgtttgatagatcgttctatgcgtcct
tctttaccgaaccggttaatgcaggatgttcaagtcttatcttatgtatggtcttatgat
ggggtgactctccccgatcctatagctatttgtggtgtttctgcagcactagcaatttct
gacattcctcaaattagtgttgtagctggtgttcgtgttggctttgtcaacaatagttgg
gtagttaacccaacaaaagccgaaatggatgtttctagaatggagctcgttttagcagga
accgaaaatgctattctaatgatagagggtcattgcgacttcttaacggaagagcaggtt
atcgaggctattgaatttggtcataaacacatagcaaccatttgtagagcaatcaaagac
ttgcagcaaaaggtaggcaagaaaaagaattccgatgctattgttccccttcctgaagaa
gttcaatcttctgtaaatacgtttgttgaaggcaaatttgctgatcttttaaaaattaaa
gagaaaaaagcttttgaggctgcttcgaagcaattagaaaaagaaattgtagagaagttc
ctagaagaaaatgagatcttcacagcattgaatattaagacagctttcaaacaagctaag
tcggattatatgcgtgctttgatacgcgaacaaagtgttcgttctgatggacgggcaata
acaacaatccgtcctatttctattgacacatctttcttaccaagaacccacggaagttgt
ttattcactcgtggagaaacacaaactgtggccgtttgtactttaggtagcgaggctatg
gcgcagcgttacgaagacttgaacggtgaagggttggctaaattttatttacaatacttc
ttccctcctttctctgttggcgaagtaggaagaataggttctccaggaagaagagaaatt
ggtcatggtaagcttgctgagaaagctttaagccacactcttcctgatcctgcaaagttt
ccttatactatccgtatagaatccaacattactgaatctaatggttcttcatccatggct
tctgtttgcggaggttgtttagctttaatggatgctggggtccctattaaaactcctata
gcaggtattgctatggggttaatcttagataatgatcacgtcactattctttcagatatt
tctggattagaagattatttaggagatatggactttaaggttgctgggaataccgaaggg
atcacagcattccaaatggatatcaaggtagagggcatcacccctacaattatgcaagca
gccctagctcaagctaaagctggccgtcaacatatcctggatattatgaaagaggctctt
gcagctccaaaaacagacttatcacaatatgctcctcgtattgaaacgatgcagattaag
ccaaataaaattgctactgttattggacctggaggaaaacagattcgtcaaattattgaa
gaagctggagtgcaaattgatattaatgactcaggtcttgtcagcatttcagcatcttct
ccacaagcgatagaaaaagctaagtctatgattgaaggtttagttggagaagttgaagtt
ggtaaaatctacgaaggtcgagtgacatctattgttcctttcggggctttcgttgaaatt
cttcctggtaaggaaggtctttgccacatttctgaattctctaaacaacgtatagaaaac
gttggtgatttcgttaagcaaggagacatcctggctgttaaattgctaagcattaatgaa
aaaggccaatataaactcagccataaagctactctcagcgagtag
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