Chlamydia caviae: CCA_01005
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Entry
CCA_01005 CDS
T00125
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cca
Chlamydia caviae
Pathway
cca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCA_01005 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cca03400
]
CCA_01005 (recD)
Enzymes [BR:
cca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CCA_01005 (recD)
DNA repair and recombination proteins [BR:
cca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCA_01005 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
PIF1
UvrD-helicase
Viral_helicase1
SLFN-g3_helicase
AAA_11
Helicase_RecD
AAA_22
AAA
DEAD
PhoH
AAA_12
nSTAND3
IstB_IS21
ATPase
ResIII
DnaB_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AAP05744
UniProt:
Q821D7
LinkDB
All DBs
Position
complement(1165264..1166769)
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AA seq
501 aa
AA seq
DB search
MPSLSLDIPHYLYDIVQQQLVLPLDLAFAKKYASPESKKAFAFLALSSALWRCGYPFLNI
DKDRLFPSLSGVSEKLFYEYFKALPEDVCSSLFVIENNRIYLRSLYAVREKLFSKLSLLS
QASPRYNVTTESLPKLSSEQNIVFQKAINSCFSLICGGPGTGKTFLAIQIILILIKQYPK
IRIAIVSPTGKATSHIRQILSKHDISEDNVSIQTIHRFLQEHVYHQCSSVDLLLVDEGSM
VTFNLLHSLVNTLSGENKEGKIIADNLIILGDANQLPPIGVGAGNPLQDLISRFPDRALH
LQVSHRAKTDRVQNFSKAILEKQSIPFTPLPSMHSAIAKIKEAFIQTPSSQTQLCILTPM
RHGPWGYLRLNELIFNEIQKTHPNLPIPIMITERYEAWGLFNGDTGFLCPKTQQLFFPHC
RSIDSREFSYYTYNYAMSVHKSQGSEYDDVIVIIPKGCEIFDVSILYTAITRAKHSISVW
ADSETLNKIIKKPHKYTYGVE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgttaagtctagatatcccccattatctttatgatatagttcagcaacagctt
gttctacctttagatctagcttttgctaagaaatacgcttccccagagtcaaaaaaagcc
tttgcctttcttgctctttcttctgctctttggcgttgtggctacccttttcttaatatt
gacaaggaccgcttatttccttctttgtctggggtttcagaaaagcttttttatgagtat
ttcaaggctcttcctgaagatgtttgttcatctttatttgttatagaaaacaacaggatt
tacttacgttctttgtatgcagttcgagaaaagcttttttcaaagctttctttgttatca
caagcctctccaaggtacaatgtaacaacagagtctctccctaaactatcttcagaacaa
aatattgtttttcaaaaagcgattaacagctgcttttctttaatttgtggaggccctgga
acagggaaaacttttttagctattcagatcatacttattttaattaagcagtatcctaaa
attcgtattgctatagtttctcctacaggaaaagcaacttcacatattcgccagatactc
tctaaacatgatatttctgaggataatgtctctatccaaactatccataggtttttacaa
gagcatgtctatcatcagtgtagttctgtagatctattactggttgatgaaggttctatg
gtaacgtttaaccttttgcatagcctggtaaatacattatcaggagagaacaaagaagga
aaaattatcgccgataatttaattatactaggcgatgcgaatcagcttcctcctataggc
gtgggggctggtaaccctctccaggatttaatatcacgtttccctgatagggccttacat
cttcaagtttctcacagggcaaaaacagatcgagttcagaatttttcgaaagctatttta
gaaaaacaatcgattccgtttacgccattaccctcgatgcattccgcaattgctaagatc
aaagaggcgtttatacaaaccccctcatctcaaacgcaattatgtattttaactcctatg
cgtcatggtccctggggttatttgcgtctaaacgagttgatttttaatgaaatacaaaaa
acacatcccaatctgcctattcctattatgattacagaacgttatgaagcttggggatta
tttaatggggatacaggatttttatgcccgaaaacgcaacagctattcttcccacactgt
cgctctatagattctagggagttttcctattatacttataattatgcgatgtctgtgcat
aaaagtcagggaagcgaatacgatgatgtgattgtcattattcctaaaggatgtgaaatt
tttgatgtatccattctctatacggctattacacgcgctaagcatagcatatctgtgtgg
gcggacagtgagacattgaataagatcataaaaaaaccccacaagtatacttatggggta
gaataa
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