Cyanistes caeruleus (blue tit): 111931087
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Entry
111931087 CDS
T05602
Symbol
SNRPF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111931087 (SNRPF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111931087 (SNRPF)
03041 Spliceosome [BR:
ccae03041
]
111931087 (SNRPF)
03032 DNA replication proteins [BR:
ccae03032
]
111931087 (SNRPF)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111931087 (SNRPF)
Spliceosome [BR:
ccae03041
]
Complex A
U1 snRNP components
Sm proteins
111931087 (SNRPF)
U2 snRNP components
111931087 (SNRPF)
Complex B
U1 snRNP components
111931087 (SNRPF)
U4/U6.U5 tri-snRNP components
111931087 (SNRPF)
Complex C
U2 snRNP components
111931087 (SNRPF)
DNA replication proteins [BR:
ccae03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111931087 (SNRPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111931087
NCBI-ProteinID:
XP_023785233
LinkDB
All DBs
Position
1
AA seq
158 aa
AA seq
DB search
MRKNFFMLKTAEHWNRLPRRMDAARLSPPAGAAGTTRSGCRSPPARCRGHRAAQALPPPG
DAPARSGPCFPLQSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTE
EYIDGALSGHLGEVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaatttcttcatgttgaagacggcagagcactggaacaggctgcccagacgg
atggacgccgccaggctttcgccgcccgcgggggccgccggcaccaccaggagcggctgt
cggagccctcccgcccggtgccgcggccaccgcgccgctcaggcgctgccacctcctggg
gacgcgcccgcaaggagcggaccgtgctttcctctccagagcctgcccctcaaccccaag
ccgttcctgaacgggctgacggggaagccggtgatggtgaagctgaagtgggggatggag
tacaagggctacctcgtctccgtggacggctacatgaacatgcagcttgcaaacacagag
gagtacatagatggtgcactgtctggacacctgggtgaagttttgataaggtgcaataat
gttttgtacatcagaggtgtggaagaagaggaagaagatggagaaatgagagaatag
DBGET
integrated database retrieval system
