KEGG   Cyanistes caeruleus (blue tit): 111931838Help
Entry
111931838         CDS       T05602                                 

Gene name
HDAC4
Definition
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    111931838 (HDAC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccae03036]
    111931838 (HDAC4)
Enzymes [BR:ccae01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111931838 (HDAC4)
Chromosome and associated proteins [BR:ccae03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     111931838 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 111931838
NCBI-ProteinID: XP_023786316
LinkDB All DBs
Position
7
AA seq 1089 aa AA seqDB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAPSSVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTGTADSACNSAPG
SGPSSPNNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLG
LPATGPSSAGQAQQDAERLAIPALQQRISLFPGTHLTPYLSTTTLERDGGTAHNPLLQHM
VLLEQPTAQTPLVTDWYLSGLPLHAQPLVGGERVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPTEPARQHESHPEETEEELREHQAL
LEEPYGDRAAGQKEPPALASVVQVKQEPIESDEEEAEPQQELESGQRQAEQELLFRQQAL
LLEQQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVH
SEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKIL
IVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFT
GGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQQRANANAVH
SMEKVIEIHSKYWHSLQRFASTVGYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPED
EPMEEEPPL
NT seq 3270 nt NT seq  +upstreamnt  +downstreamnt
atgagctcccaaagccatccagatgggctttctggcagagaccagccagtggagctgttg
aatccacctcgagtgaaccacatgcccagctctgttgacgtgagcacagccctgcccttg
caagtggcgccgagctcggtgcccatggacctgcggctggaccaccagttctccatgccg
gtgacagagcccacgctgcgggagcagcagctgcagcaggagctgctggccctcaagcag
aagcagcagatccagaggcagatcctgattgcagagttccagcggcagcatgagcagctt
tcccggcagcacgaggcgcagctgcacgaacacatcaagcagcagcaggagatgctggcc
atgaagcatcagcaggagctcttggagcaccagaggaagttggagcagcaccgacaggag
caggagctggagaagcagcaccgagagcagaaactgcagcagctgaaaaacaaagagaaa
gggaaagagagtgcagtggcaagcacagaagtgaagatgaagttgcaggaatttgtgtta
aacaagaagaaggctctggcccaccggaatctcaaccactgcatatccagcgaccctcgc
ttctggtacgggaagactcagcacagctctctggaccagagctccccaccccaaagcggc
gtctccggcacctacaaccacccggtcctggggatgtacgattccaaagacgacttccca
ctcagaaaaacagcctctgaacccaacctgaagctgcgctccagactaaagcagaaggtg
gcagagaggaggagcagccccctcctgcgcaggaaggacgggcctgtggtgacggcgctc
aagaagcgccctctggatgtcacaggtactgcggactctgcatgcaacagtgctcctgga
tctggtcccagctctccgaacaacagctccaacaacatcagcactgagaacggaatcgca
ggatcagtcacgagtatccaagcagagaccagcctggctcacaggctcgtgaaccgcgag
ggctccgtgacacagctcccgctctacacctcgccctccctgcccaacatcacgctagga
ctgcctgccaccggcccctccagcgcgggacaagcacagcaggatgcagagaggctcgca
atcccagccttacagcagcggatctccttattccctggcactcacctcactccctacctg
agcactacaacgttggagagggatgggggaactgcacacaaccctctcctgcagcacatg
gtcctactggaacagccaactgcacaaacgcccctggtcacagactggtatctttcagga
ctgcccctgcacgcacagcccctggtgggtggagagagggtctccccttcgatccacaag
ctgcggcagcaccgcccgctcgggcgcacccagtctgctcccctgccccagaacgcccag
gccctccagcagctggtgatccagcagcagcaccagcaattcctggagaaacacaaacag
caattccagcagcagcagctgcacatcaacaagatcatctccaagcccacggagccggcg
cggcagcacgagagtcaccccgaggagacggaggaggagctgcgggagcaccaggccctg
ctggaggagccctacggcgacagggccgcgggccagaaggagcccccggcgctggccagc
gtggtgcaggtcaagcaggagcccatcgagagcgatgaggaggaggcagagccgcagcag
gagctggagtccgggcagaggcaggcggagcaggagctgctcttccgccagcaagccctg
cttctggagcagcagcggattcaccagctgaggaactaccaggcgtcgctggaggccgct
ggcatgcccgtgtccttcgggggacaccggcccctgtcccgggcacagtcctcccccgcc
tcagccaccttccccatgtccgtgcaggagccacccactaagccaaggttcacaacaggc
cttgtgtacgacacgttgatgctgaagcaccagtgcacctgtggaaacaccaacagccac
cccgagcacgcgggcaggatccagagcatctggtccaggctccaggagacggggctgcgg
ggcaagtgtgagtgcatccgtggcagaaaggcaacgctggaagaactgcagacggttcac
tcggaagcccacacgctgctttatggcacaaaccctctgaacaggcagaaactggacagc
aagaagcttctaggttccctaacgtcgatgtttgtcaggctgccttgcggtggtgtcggg
gttgacagtgacaccatttggaacgaggtgcactcgtctggcgctgctcgcctggccgtg
ggctgtgtcatcgagctggtgttcaaagtggccacaggagaactgaagaatggatttgct
gttgtccggcccccgggccaccacgcggaggagagcacacccatgggtttctgctatttt
aactctgtggcaattgcagccaagctgctccagcaaaggctcaatgtgagcaaaatcctc
atcgtggactgggatgtccaccatgggaatggtactcagcaggccttctacaacgatccc
aacgtcctttatatctcactacaccgctatgatgatggcaacttcttcccaggcagcggt
gctccagatgaggttggcacaggagcaggagtcggtttcaatgttaacatggcatttact
ggtggcctggatccgcccatgggagacacggaatatttaactgccttcaggacagtagtg
atgcccattgccaatgagtttgccccagacgttgtgctggtgtcatctggtttcgatgct
gtggaagggcaccccacacccctcggaggatacaatctgtcagcaaaatgcttcgggtac
ctgacgaagcagctgatgggcctggccgggggccgcgtcgtgctggccctggagggtggc
cacgacctcacggccatctgtgatgcctcggaggcttgtgtgtcagccctgctgggaaac
gagcttgaccctcttccggagaaggttttccagcagagagcaaacgctaatgcggtgcat
tccatggagaaagtcattgagatccacagcaaatactggcattccctccagcgtttcgcc
tccacggtgggatattccctggtggaggcccagaagtgtgagaatgaggaggcggagacg
gtgacggccatggcatcactgtcagtgggcgtgaagccggcggagaagagacctgaggac
gaacccatggaagaggagcctccactgtag

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