Cyanistes caeruleus (blue tit): 111934819
Help
Entry
111934819 CDS
T05602
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04010
MAPK signaling pathway
ccae04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111934819
04020 Calcium signaling pathway
111934819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccae04040
]
111934819
Ion channels [BR:
ccae04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111934819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
SieB
Motif
Other DBs
NCBI-GeneID:
111934819
NCBI-ProteinID:
XP_023790763
LinkDB
All DBs
Position
1
AA seq
1766 aa
AA seq
DB search
MAEYIPQPPSTWPAGPQPPHASAIFPLEPVDLGISEQQTPPEQPPSSLELGEDEEVTSPP
DPDVPYPDLAPVVFFCLKQTTSPRSWCIKMVCNPWFECVSMMVILLNCVTLGMYQPCEDM
DCLSDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEY
SLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGI
IGVQLWAGLLRNRCFMEENFTVQGDIVLPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPP
LKERGHECCLDKDDYYYYNSVRQEFNISGMCVNWNQYYNVCRTGNANPHKGAINFDNIGY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETK
QREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYVCHILRKAKRRTLGLYNSVQSWRH
GHVQEPGEAKPGGNRKSQRHYRLCQQHNSLGCPSQGLVQPIAVTATSDPTNCPRCHRAEH
EASRRLSVLDSAGSDQEDGGASEGEGEGSQEDQGASALEKEEEVEEGGRLKLCSDMWREV
RVKLRVIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEISNVVFTSMFALEMIL
KLAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALR
RQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLW
AIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEG
DANRSYSDEDQSSSNMEEFDQFQEVQEGSDPKLCAIPVTPNGHLDPSLPSSNPPVVSGGV
TNSSRNSLQLDQIRVAVGSRKSSVMSLGRMTYDQRSLSSSRSSHYGAWSRSGAWGSRRSS
WNSLARGHSLKHKPPSAEHESLLSGETHKAADGEPDGTGRVFHHRRTLSLDNKGSCDLLE
LASVPPGHRVTHRLGAPPGASEHQDCNGKMPSIVKEIFPKMNNHKERGEDDDEIDYSLCF
RIRKMMEVYKPDWCELREDWSIYLFSPQNRFRLLCQTVIAHKLFDHVVLAFIFLNCITIA
LERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGDQAYLRSSWNILDGFLV
FVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGN
IVLICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCVAANYKWVHHKYNFDNLGQ
ALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCHIRLLIHSVCTSHY
LDIFITFIICLNVVTMSLEHYNQPVSLETALKYCNYLFTTVFVFEAVLKLVAFGLRRFFK
DRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMATGMRAL
LDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAF
LTLFQVSTGDNWNGIMKDTLRDCSHDDRSCLSNLQFISPLYFVSFVLTAQFVLINVVVAV
LMKHLDDSNKEAQEDAEMDAELEMEITHGLCSHKSGSPNSGQGKGAGTGGGGGRTDPEGH
LCMRCYSPAQEPEGQQRRDGADQLKV
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacatcccccagcctccctccacctggcccgcaggcccacagccccctcac
gcttctgccatcttcccactggagcctgtggatctggggatatcggagcaacaaacacca
ccggagcagccaccgtcctccctggagctgggtgaggatgaagaagtcacctcccctcca
gatcctgatgtcccctatccagacttggccccagttgtcttcttctgcttgaagcagacc
accagcccacggagctggtgcatcaaaatggtgtgcaacccctggttcgagtgtgtcagc
atgatggtgattttgctaaactgtgttaccctgggaatgtaccagccatgtgaggatatg
gactgcctttctgacaggtgtaaaatcttgcaggtgtttgatgatttcatcttcatcttc
tttgccatggaaatggtcttgaagatggtggccctggggatctttggcaagaagtgttac
cttggagatacctggaaccgcttggatttcttcattgtcatggctgggatggtggagtac
tccctggatctccaaaacattaacttgtctgcaatccgtacagtgcgtgtcctgagaccc
ctgaaagctatcaaccgtgtgcccagcatgcgcatccttgtgaacctgctcctggacacc
ttgcccatgctggggaacgtccttcttctctgcttctttgtcttcttcatctttggcatc
attggggtgcagctgtgggctgggctgctccgcaaccgctgcttcatggaggagaacttc
acagtacaaggtgacattgtcctgcccccttattaccagccagaggaagatgatgagatg
ccctttatctgctcgctgtcaggagacaacggaattatgggctgtcacgaaataccccca
ctgaaggagcgaggccatgagtgttgtttggacaaggatgattattattattacaattca
gtccggcaagagttcaatatcagtggcatgtgtgtgaactggaaccagtactacaacgtg
tgccgcaccggcaacgccaacccgcacaagggtgccatcaactttgacaacattggctat
gcctggattgtgatatttcaggtgatcacactggaagggtgggtggagatcatgtactat
gtgatggatgcccattccttctacaattttatctactttatcttgttgataatagtgggc
tccttcttcatgatcaacctgtgcctggtggtcatcgccacgcagttctcggagaccaag
cagcgggagcaccagctgatgcaggagcagagggcccgctacctctcctccagcactgtt
gccagctacatggagccgggagactgctacgaggagatcttccagtacgtctgccacatc
ctgcgcaaggccaagcgccgcaccctggggctgtacaacagcgtgcagagctggcgccac
ggccacgtgcaggagcccggcgaggccaaacccggcgggaacaggaaaagccagaggcac
tacaggctttgccagcagcacaactctcttggctgcccttctcagggcttagtccagccc
atcgctgtgacagcaacctctgatcccaccaactgcccacgatgccatagggcagaacat
gaagcatccagaaggctctcagtcctggatagtgctggctcagaccaggaggatggagga
gccagtgaaggggagggagagggcagccaagaggaccagggtgcctcggcgctggagaag
gaggaggaagtggaagaaggaggccggctgaagctctgcagtgacatgtggcgagaagtg
agggtcaagcttcgagttattgtggacagcaagtatttcaaccgtgggatcatgattgca
atcctagtgaacaccatcagcatgggcattgagcaccacgaacagccagaggaattgacc
aacatcttggagatcagcaatgttgtctttacaagcatgtttgccctggagatgatcctg
aaacttgctgcttttggcctctttgactaccttcgcaacccctacaacatctttgacagt
atcatcgtcatcatcagcatctgggagatcattggccaggcagatgggggcctctctgtg
ctgaggacattccgcctcctccgggtgctgaagctggtgcgtttcatgccagcgctgcgc
cgccagcttgtggtgctgatgaagactatggacaacgtagctaccttctgcatgctcctc
atgctcttcatcttcatattcagcatcctgggaatgcacatctttggttgcaagttcagc
ctcaggacagacacaggagatacagttcctgaccggaagaattttgactccctgctgtgg
gccattgtcaccgtcttccagatcctaacccaggaggactggaatgttgtactctataat
ggcatggcctccacctcaccgtgggcttccctctactttgtggctctcatgacatttggc
aattatgtactctttaatcttctggtggccattcttgtggagggattccaggctgagggt
gatgccaaccggtcatactcagatgaagatcagagttcttcaaacatggaagagtttgat
caattccaagaggtccaggaaggctcagatcccaaactctgtgcaattcctgtgacacct
aatgggcacctggacccatccttgccctcttccaacccaccagtggtttctgggggagtc
accaactcttcacgcaactcactgcaacttgaccagatccgtgttgctgttggctctcgg
aagagcagtgtgatgtccctggggagaatgacttatgaccagcggtccttgtccagctcc
cgcagttcccactacggcgcctggagccgcagcggagcctggggaagccgtcgctccagc
tggaacagcctggcccggggacacagcctgaaacacaaacctccctcagctgagcatgag
tccctcttgtctggggaaacgcacaaggcagcagatggggagccggatgggacaggaagg
gtgtttcatcaccgccggacactctctctggataacaaaggctcctgtgacctgctggag
ttggcctcggtccctcctggccacagagtgacccacaggctgggagcaccacctggggcc
agtgaacatcaggactgcaatggcaaaatgcccagtattgtcaaggagatcttcccaaag
atgaacaaccacaaagaacggggagaggatgatgatgaaatagattatagcctgtgcttt
cgcatccggaagatgatggaagtctataagccagactggtgtgaattacgggaagactgg
tccatatatctcttctctccacagaacaggtttcgcctcctctgccaaaccgtcattgct
cacaagctctttgaccacgtagtgctggccttcatcttcctgaactgcatcacgattgcc
ctggaaagacctcagattgaacacagaagcacggaaagaatctttctcactgtgtccaac
tacattttcacagcaatctttgtagctgagatgacactgaaggtggtctctctaggcctg
tattttggggaccaagcttatctccgcagcagctggaacatcttggatggcttcttggtc
tttgtgtctctcattgacattgtggtctcagtggcctctgctggtggtgccaaaatcctg
ggggtgctgcgagtgctccggttgctgcgcacactacgtcccctccgagtcatcagtcga
gcccctggtctgaagctggtggtggagacactcatttcttccctcaagcccataggaaac
attgtcctcatctgctgtgctttcttcatcatctttggcatcctgggagtgcagcttttc
aagggcaagttctaccactgcctgggggttgacatcaggaacatcaccaaccgctccgac
tgcgtggcagccaactacaagtgggtgcaccacaagtacaacttcgacaacctgggacag
gctctgatgtccctctttgttttggcttccaaggatggctgggtcaatattatgtacaat
ggacttgatgctgtggctgttgaccagcagccagtgacgaacaacaacccctggatgcta
ctctacttcatctcctttctcctcatcgtcagtttctttgtgctcaacatgtttgtgggg
gtggtggtggagaacttccacaagtgccggcagcaccaggaggctgaggaggcgcgccgg
cgggaggagaagcgcctgcgacgcttggagaagaagcgaaggaaggcgcagcgtttgccg
tactatgctacctactgccacatacgcctccttatccattcggtctgcaccagccactat
ctggacatcttcatcactttcatcatctgcctcaacgtggtcactatgtccttggagcac
tacaaccagcctgtgtccctggagaccgccctcaagtactgcaactacctgttcaccact
gtctttgtgtttgaggcagtcctcaagctggtggcatttggtctgcgacgattcttcaaa
gacaggtggaaccagctagatctggccattgtgctgctgtctgtcatgggcatcacattg
gaagagattgaaatcaacgctgctctcccaataaaccccactatcatccggatcatgaga
gtgctgcgtatcgcccgggtcctgaagctactgaagatggccacaggaatgcgagcactg
ctggatacagttgttcaagctctgccacaggtgggaaaccttggactccttttcatgctc
ctctttttcatctacgctgctctaggagtagagctctttggaaaactggtgtgcaacgat
gagaatccctgtgagggcatgagccgccatgccaccttcgagaactttgggatggccttc
ctcacacttttccaggtgtccacaggagacaactggaatgggatcatgaaggataccttg
cgtgactgcagccacgatgaccggagctgtctcagcaacctgcagttcatctccccactg
tactttgtcagctttgtgctcacagcccagtttgtcctcatcaacgtggtggtagctgtg
ctcatgaaacatcttgacgacagcaacaaggaggcccaggaggatgcagagatggatgct
gagcttgagatggaaattactcatgggctatgctcccacaagtcaggctctccaaattca
ggacagggaaaaggagcaggaacaggaggaggtggtggtagaacagatcctgaaggacat
ctgtgcatgagatgttactctccagcccaggaacctgagggccagcagaggagggatgga
gcagatcagctaaaggtgtga
DBGET
integrated database retrieval system
