Cyanistes caeruleus (blue tit): 111937408
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Entry
111937408 CDS
T05602
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111937408 (ZC3H13)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
111937408 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
111937408
NCBI-ProteinID:
XP_023794572
LinkDB
All DBs
Position
1
AA seq
1647 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKDKKAST
VSSPLLEQQRSSKSNQSKKKGPRTPSPPPPVQEETSLGKKHKEKHKAKERSEEKAREVKE
RGRDFERHKEKKEKQRDPSESSRRQKRSPSPADHSGSNSSPSREYSPPAARRRQTSRAPA
KSTTQKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSPPQRKRSPSRHRSPGRDKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRESRDGRDRRDTRDTRDRREPRESRDTRDSRD
ARDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDLRSYGRSHGREESSRT
EARNDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQVDGHSSSGNYHDSWESRSS
YTDRDRYDSRDQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERDRARERERDRERDKDRD
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQR
DWDDKEKGREDRRDKREDTREERGSRDVHEERKSKKRHRNESSPSPRQSPKRRRDHSPDS
DAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHVTEERQSRWKEEERKSDRKESSRRYEEP
EFKERVSSADKQREQPDASEGSRSRVQENLGHRPSEERDASDRMHDDSKKKSKIQKKATK
KKKDEDSGVERYANEPATEESQVFSPKKGQKRKNVEKKRKRSKGDSEVSDEEVVPHHKKK
KGPRTPPVTKEELVEAPPEKAVAEVPAKREDTTFSDWSDEDVPERGDIVVPERATEDSHR
KSHRTRTEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
TGRKRILHSSSRDRDRDRDREKKSLEITERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRR
SSPESDRQVHSRSGSFDSRERLQERDRHEHDRERERDRRDGRQRDWDRDVDKDWPRSRER
ERLRERERDREKRRELERERDRQLPDTAERERERTLDISSQKESKHSETKLDRDHEKEFD
GICRDSATSEKEKTDKDLGPLQGFEDGNEAEKVESLEGGEDETKTNDVQSLGSGAGEYEP
ISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLKF
TPGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHELGALNMAALRRKEER
AGLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRKT
VCQVPGQEKTEDSKIPQPALQQEVCVT
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatgttgaggcagagcca
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcttcacgaggaagg
cacagagaaaaggaggatatcaaaattacaaaggagcgaacaccagaaagtgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gaacaggaaaacatggagaaacgagaggaaatagtaattaaaaaagagatttctccagag
gtggtaagatctaaattatcaccatcaccatcaccacgaaagtctagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagctagtaagaaagacaagaaagcatctact
gtctcttctccgcttttggagcagcagaggagttctaaaagtaaccagagtaaaaagaaa
ggtcctcgtacccctagccctcctcctccagtacaagaggaaacttcccttgggaaaaaa
cacaaagaaaaacataaagcaaaagaacgttcagaagaaaaggcaagggaggtgaaagag
agagggcgtgactttgaaaggcacaaggagaaaaaggagaagcagagggatccgtctgaa
agctcccgtagacagaaacgttctcctagtcctgcagatcactctggcagtaattcttcc
ccttccagggagtactcaccacctgctgcaaggagaaggcaaacctcccgagctccagcc
aagtcaaccactcagaaacataacttctcaccctctcgcaggtctgcttctccatcaggt
cagcatcattctcccatatcctccagacatcactcctcgtcctcacagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaaagaactccttctccatcctatcaaagg
acagcttccccgcctgcaaggcggtcatcttccccctatcccccacactcttcctctcca
cctcagaggaagcgaagtccttcgaggcaccgatctcctggaagagacaagggaagacac
gatcgtgatcggacttcacagtctcatgacaggcgccacgaaaggcgggacgaaacaaga
gggaaaagagaaaaagaaagagaaacaagagatgatcgtgattatgaccaagagcagagt
acctccagggaccacagggatgacagagagtctcgtgatggaagagatcggagggacaca
agagacaccagagatcggcgggagccacgggaatccagagatactcgagactccagagac
gcccgggattatagcagggataccaaagacagtcgtgaccagagagactcgcgctccaca
cgagactctcatgactacagagacagagagagccgtgatgcccataaaaaggatgaccag
tatcaagacgacttgcgcagctatggaagatcccatggcagagaggagagctctcgtact
gaagcaaggaatgactccagaagtgactccagaaatgagagcagaagtgatagaactggc
aggagtcgaggcagaggtccagagttatctgacaaaggaagtcgggggactagaggatcc
caggttgatggtcacagcagtagtgggaactaccatgacagctgggaatcaaggagtagc
tacactgatcgggatcgctatgatagtcgggatcaagcaagggactcctcctttgaaaga
agacatggtgaacgggataggcgtgacaacagagaaagagatcagagagcaagctcaccg
gtacgacaccaaggacggagtgatgatctcgagcgggatgagaggagagaggagcgaagg
gtcgatcggtctgatgacaggagagacgaaagggcccgggagagagagcgggaaagggag
agggaccgagagagagaaagagaaagagaccgggaaagagagagagagaaagaaagagag
ttggaacgagatcgtgctcgggaacgggagagggaccgtgagcgggacaaagacagggac
cgtgagcgggaccgagacagagaccacgacagggaaagggaacgagagagggagagggag
aaggagcgggagcgagagcgggaggaacgagaaagggagcgagaacgagagagagatcgg
gagcgagagcgcgaaagggagagaggtcgagaccgagacaaagaaagagaccgccagaga
gattgggatgacaaagaaaaaggaagggaagaccgcagggataagagagaagatactcga
gaagaaagaggctcaagagatgtccacgaggaaagaaaatccaagaaacgtcacagaaac
gaaagcagtccaagcccccgtcagtcaccgaaacgtcgccgtgatcattctcctgatagt
gatgcttacaacagtggagatgataaaaatgaaaagcacagactcctgagccaggttgtg
cggccacaggaatcccggtcactgagcccctctcacgtcacggaggaacggcagagccgc
tggaaagaggaggagcgaaaatcggacagaaaggaaagttcccggcgctatgaagaacca
gagtttaaagagagggtttcttcagcagataaacaaagagagcaaccagatgcttcagaa
ggttcacgatccagggttcaggaaaatcttggacaccgtccttctgaagaaagagatgct
tctgatagaatgcatgatgacagcaagaagaagtctaagatacagaaaaaggccacaaag
aagaagaaagatgaagacagtggggtggaaaggtacgctaatgaaccagcaactgaggaa
agccaggtcttttcccctaagaagggtcaaaaacggaaaaatgtggagaaaaagcgaaag
agatccaagggtgattctgaagtttctgatgaagaagttgttccacatcataaaaagaaa
aaaggcccaagaacccctcctgtaactaaagaggaattggttgaagcaccacctgagaaa
gcagtggcagaggtccccgcaaaaagagaagatacaacatttagtgactggtcagatgaa
gatgttcctgaacgtggtgacattgttgttccagaaagagccactgaggattcccatagg
aagagtcacaggacgaggacagaaaaggtggaagcacctcatgttactatagaggatgga
ccacaccgtaagcctgtggaccagaagcgcagcagcagcctcggtagcaatcggagccat
gcctccagcaggcttagatccccctccaatgagtcagcacatcgcagtggggatgatcag
actgggaggaagaggatcctgcacagtagctctagggacagggatagggacagggacaga
gagaagaaaagcttagaaatcactgaaaggaagtcccgaattgatcagttgaaacgagga
gaacccagtcgcagcacatcttcagatcgtcaagattcaagaagccacagttcaagaaga
agttcccctgagtcagatcgtcaggttcattccagatccgggtcctttgatagcagggaa
aggcttcaggagcgagatcgacatgaacatgatcgagaacgagagagagacaggagagat
gggagacagagagactgggaccgagatgtggacaaagactggccaaggagccgggagcga
gagagactcagggagcgagagagggacagggagaaaagacgggagctggagagagagagg
gaccgacagctgcctgatactgctgagagagagagagagagaactcttgacatctcctct
caaaaggaatcaaagcacagtgaaacaaaactggacagagatcatgaaaaggagtttgat
ggtatttgccgggactcagcaacttcagagaaggaaaaaacagacaaagatttaggacct
ttacaaggctttgaagatggaaatgaggccgaaaaggtagagagtttagaaggaggagag
gatgaaacaaagactaatgatgtgcagtcactggggtctggtgctggagaatacgagcca
atcagtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgtgaggatcaa
caggaggatgagaagatgcctggtaaaaatccagtggatgttatagatgtagactggtcc
agtcttatgccaaagcagccaaaagaaccacgtgagcctggggctgcgctcttaaaattc
acaccaggtgctgttatgctgagagttggcatttccaagcggttggcaggaccagagctc
ttcaccaaaataaaagagacatgccagagagtgttagaaaaacctaaagatgcagaaaac
ctttttgaacacgagctgggagcactgaacatggctgcacttcggcgaaaagaggagaga
gccggccttctcagcaatctgggtccttgctgcaaagcgctgtgcttccgcagggattct
gcaattcggaagcagctcatgaagaatgaaaagggtgcaacaaaacaaacttacacaaat
tccgcagcgatggacagcgacttgttacggttgagtctacggttattcaaacgaaagact
gtgtgccaagttcctgggcaggaaaagacagaggacagcaaaattccgcagccagctctc
cagcaggaagtgtgtgtgacttga
DBGET
integrated database retrieval system
