Cajanus cajan (pigeon pea): 109787953
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Entry
109787953 CDS
T04868
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaj03016
]
109787953
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
109787953
Transfer RNA biogenesis [BR:
ccaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109787953
Prokaryotic type
109787953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
MgtE_N
Motif
Other DBs
NCBI-GeneID:
109787953
NCBI-ProteinID:
XP_020202150
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MENSDTMLTTSSLPPPPPVAAEEPEPKKLKMSTTTSDDEECTTATGTKIRYKRRKVAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEALYMSGAVPEQDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGFVDRLNSNLTSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDP
NCHRDTVMASLGSGNELVKCLECSERGRKVVGLVGNRKHNLELEAMDIDAGISSNTNAVV
DSAVTGDVELSLSKGDDNHLNEEFGNDTTGDLSSKTDLETVIPDCEEGTPLNGESVKNSD
ILEEEKVNGEDESTDGSGFCYGEKERERFNKILKYFVGTHNFHNFTTRTKAEDPAARRYI
ISFNANTTLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDKALQQDVN
INVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKDYEKEAEEFKMKYIYSHISSTEQKE
GTVALWLHSLNHINYPDLRIVNEEAIPDNKGADIEEAVTNNKSADVEETINYNKRVDVEE
AINDNKGADIEEAITDNKRADIEEAVNHNKRATTEEAINDNKRADIEETITDNKRADIEE
AITDDKRVDIEEAITDNKC
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagatacaatgctgacaacttcatccctgcctccaccacctccagtagct
gcggaggagccagagcccaagaagttgaagatgtccaccacgacttctgatgatgaagaa
tgcacaactgccacaggcaccaagataagatacaagcgccgtaaggtagctattttcttt
gcttactgtggtgttggctatcagggtatgcagaaaaaccctggtgcaaagaccattgaa
ggcgatctagaagaagctttatatatgtctggagctgtacctgaacaggatcgtggaatt
cctaaacggtacgactgggctcgctcagctagaacagataaaggagttagtgctgttggt
caggttgtctcaggccgattctatattgatccacctggctttgttgaccgccttaattca
aatcttacatctcagataaggatctttggttacaagcgtgtgacagcttcttttaatgcc
aagaagttctgtgaccggaggaggtatgtctatctcattcctgtatttgctcttgatcca
aattgtcatcgtgatactgtcatggctagtttgggatctggaaatgagcttgttaagtgt
ttggagtgttctgagagaggccgaaaggtggtaggattagttggtaatcgtaagcacaat
ctggaactagaagctatggatattgatgctggtatttcatcaaacacaaatgctgtggtt
gattctgcagttacaggtgatgtggagctttctttgagcaaaggtgatgataatcattta
aatgaggaatttgggaatgatactacgggtgacttgagctctaaaactgatcttgagact
gtgattcctgattgtgaagagggtactcctttgaatggtgaatctgtgaaaaattcagac
atccttgaggaagaaaaagtgaatggagaggatgagtctaccgatggaagtgggttctgt
tatggtgagaaggagagggagagatttaataaaattttaaagtattttgtagggactcat
aatttccataacttcactactagaacaaaagctgaggaccctgctgctcgtcgatacatt
atttcattcaatgcaaacaccactcttgtagttgagggtatggaatttgtaaagtgtgag
gttgtgggacagagcttcatgcttcatcagatacggaagatgattgggttggcggtggca
atcatgagaaattgtgcaccagagtcacttattgataaagctttgcagcaggatgttaac
attaatgtgcctactgcccctgaggttggattatatttggatgagtgcttcttttcttca
tataaccagaagtggaaagatagccatgaagaattgtcaatgaaagattatgagaaagaa
gctgaggagttcaaaatgaagtacatatattctcatatctcttccacggaacagaaggaa
ggaactgttgctctttggttacattctttgaaccatataaattatccagatctgcgcatt
gtcaatgaggaagcaatccctgataacaagggagccgatattgaagaagccgtaactaat
aacaagagtgcagatgtcgaagaaaccatcaattataacaagagagttgatgttgaagaa
gccatcaatgataacaagggagctgatattgaagaagccatcactgataacaagagagct
gacattgaagaagctgtcaatcataacaagagagctaccactgaagaagccatcaatgat
aacaagagagctgatattgaagaaaccatcactgataacaagagagctgatattgaagaa
gccatcactgatgacaagagagttgatattgaagaagccatcactgataacaagtgttga
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