Cajanus cajan (pigeon pea): 109804649
Help
Entry
109804649 CDS
T04868
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109804649
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109804649
Complex C
U4/U6.U5 tri-SnRNP related factors
109804649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
Motif
Other DBs
NCBI-GeneID:
109804649
NCBI-ProteinID:
XP_029128455
LinkDB
All DBs
Position
9:5143928..5147631
Genome browser
AA seq
394 aa
AA seq
DB search
MVEDANPQRPTTIMGGNHLRKSGGVYIPPFKMAMMMKEVEDKSSVEYQRLTWDALRKSIN
GLVKKVNATNIKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFP
EVGGLLLRRIVLQLKRAYKRNDKVCDDSTFSYNLMRVLLLNNHNFVILYYWLQMELCIML
LECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAH
LHGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMLESFE
SIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPHLIMQQQKQVSESESDDESGSS
DSSDSGTAISESDSASSDESDSGSDGRRRKRRRK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagatgctaatccacaacgaccaacaacaatcatgggaggtaaccatttgaga
aagagtggaggtgtttacattcccccatttaagatggcaatgatgatgaaagaagttgag
gataagagtagtgtagagtatcaaaggttaacttgggatgctttgagaaaaagtataaat
gggcttgtaaaaaaggttaatgctactaatataaaaaatataattccggaattgttttca
gaaaatttgatccggggaaggggactcttttgtcggtcatgtatgaagtcacagatggca
tctccaggatttacggatgtttttgctgccttggttgctgttgttaatactaagtttcct
gaggtggggggtcttttgctaagaagaattgttttgcagcttaagagagcttataaacgg
aatgacaaggtatgtgatgactccactttttcttataatttaatgcgtgttcttttactt
aataatcataattttgtaattttgtattattggctgcagatggaattgtgcattatgctt
ttggaatgttgcagccaagagagaacttatcttcgatattatggtcttctggggcagcgt
ttctgcatgatcaacaaagtacatcaagaaaattttgagaagtgctttgtgcagcagtac
tcgatgattcaccgactggaaacgaataaactgcgaaatgtggcaaagttttttgctcat
ttacatggcacagatgcactaccttggcatgttttatcatatatacgattgactgaagag
gacacaacttcatcttcacgtatatttattaagattctcttccaggaattatcagaacat
cttggaattcggctgctaaatgagcggttaaatgatccaacaatgctagaatcttttgaa
tccatatttccaaaagacaatccaaaaaacacaaggttctgcattaacttctttacatct
attggtctaggcggtcttactgagaacctacgtgagtatttgaagaatatgccacatcta
atcatgcaacaacagaaacaagtttcagaatctgaatcagatgatgagtcagggagttct
gattcatcggattcagggacagccatttcagagtcagactcggcaagttctgatgaaagt
gacagtgggagtgacggaagacgaagaaagcggaggagaaagtga
DBGET
integrated database retrieval system
