Cajanus cajan (pigeon pea): 109809134
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Entry
109809134 CDS
T04868
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109809134
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109809134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
109809134
NCBI-ProteinID:
XP_020227957
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All DBs
Position
11:complement(2982012..2986548)
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AA seq
656 aa
AA seq
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MASYRPFPPPPSSQIQNPIAGANHQYNNQNWGAYGDPSTSSFPPIPPNSNYQHQHHHVPY
APPNPHHAHYPYPPPPPPPPPEASYQPPPPPPPPMYYPSNNQYNNQPPPPPPPPLSPPPP
PPPVSPPPPPATQNNEERRFKEPSTSGRREYEHSNHGIAHKQHKHQQQPPLPAKKMNGPP
GRHETDEEKRLRKKREFEKQRQEEKLRQQLKESQNTVLQKTHLLSSGKGHGMVAGSRMGE
RRSTPLLSAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMSFKKDKDQYAKYTITSLE
KMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEAATPIKKDGIKRKE
RPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRSILDNLNNSERQIREIE
ASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQYVVAAFDNAPTADSEMYTKLDKSV
RDAFESKALLKSYAATTSDPDNLDKFLAYMAPAPGELSKDIYDENEDVSYSWIREYNWDV
RGDDADDPTTFLVSFDESEARYLPLPTKLVLRKKRAKEGRSGDDVEQCHVPSRVTVRRRS
SVAAIEVKDSGVYTSSKGNSSKRGGLGMDDGLEHRHRVAPDHDNDQYSGAEDYMSD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctacaggcccttccctcctccgccatcgagtcaaattcaaaaccctatcgca
ggtgcgaatcatcagtacaataatcaaaattggggtgcttatggagatccctccacttct
tcattccccccaatccctccaaattccaattaccaacaccaacatcaccatgttccatat
gcacctccgaatccccatcatgctcactatccttacccaccacctcctcctccgccgccg
ccggaggcttcataccagcctccgccgccgccacctcctcccatgtattatccctccaac
aatcagtacaacaaccagccccctcctccgccgcctcctcccttgtcgccgccgcctcca
ccacccccagtttcgccccctcctcccccggcaactcagaacaacgaagagcggcgcttc
aaggagccttccacgtctgggcggcgtgaatacgagcattccaatcatggcattgctcac
aaacagcacaagcatcagcagcagcctcctttgccggcgaagaagatgaatgggcctccc
ggtcggcatgagaccgacgaagagaagaggttgaggaagaagagggagtttgagaagcag
aggcaagaggaaaagcttaggcagcagctcaaggagtcccagaacactgttcttcagaag
actcacttgttgtcttctgggaagggccatggtatggttgccggctctcgaatgggagaa
aggagatctactcccttattgagtgctgagagggttgaaaataggctcaagaagcccaca
acatttttgtgtaagctcaaattccgaaatgaacttccagatccaagtgctcaacctaag
cttatgtccttcaagaaagataaagatcaatatgcaaaatatacgatcacatctctggag
aaaatgtacaaacccaagctttttgtggagccagatctagggatacctctggacctgctt
gatctcagtgtttacaatcctcccagtgtcagaccacctcttgctccagaagatgaagat
ttgttgcgagatgatgaagctgccactcctataaagaaagatggcattaaaaggaaagag
aggcctactgataaaggtgtagcatggcttgtcaaaacccaatatatatctcctctaagc
atggaatcaacaaagcagtctttaactgagaaacaagccaaggagctgagagagatgaag
ggtggccgcagtattctggacaatcttaacaatagtgaaagacaaatcagggaaattgaa
gcatcgtttgaagcagctaagtctgatcctgtccatgcaaccaacaaagatttgtatcct
gttgaggttatgccattgctgcctgattttgataggtatgatgatcagtatgttgttgct
gcatttgataatgctcccacagctgattcagaaatgtatactaagttggacaaatctgtt
cgtgatgcctttgaatcaaaggcacttctgaaaagctatgctgcaactacttcggatcct
gataatcttgataagtttttggcatatatggccccagcaccaggagagctgtcgaaggat
atatatgatgaaaatgaagacgtctcatactcttggattcgcgagtataattgggatgtt
cggggtgacgatgcagatgaccctacaacattcttagtttcatttgatgagtcagaagct
cgttacttgcctcttccaactaaacttgttttaagaaaaaagagggctaaagagggaaga
tcgggtgatgatgttgagcaatgtcatgtaccttcaagagtgactgtaaggcggaggtct
agtgttgctgcgattgaggtgaaggattctggggtttatacaagttcaaagggcaattcc
tcaaagagaggtggtttaggaatggatgatggtctcgaacaccgacatagagttgcaccc
gatcatgacaacgatcagtatagtggagcggaagattacatgtcggattga
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