Cajanus cajan (pigeon pea): 109812398
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Entry
109812398 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109812398
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109812398
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109812398
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109812398
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109812398
03009 Ribosome biogenesis [BR:
ccaj03009
]
109812398
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109812398
04131 Membrane trafficking [BR:
ccaj04131
]
109812398
03051 Proteasome [BR:
ccaj03051
]
109812398
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109812398
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109812398
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109812398
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109812398
Complex C
Prp19-CDC5 complex
109812398
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109812398
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109812398
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109812398
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109812398
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109812398
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109812398
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109812398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
TBCA
DDR
QSregVF_b
ParM_N
Motif
Other DBs
NCBI-GeneID:
109812398
NCBI-ProteinID:
XP_020231935
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MAKQNKEWAVGIDLGTTYSCVAVWQEQHCRVEVIHNDQGNRTTPSCVAFTDNQRLIGNAA
KNQAATNPTNTVFDVKRLIGRRYSDPIIENDLRLWPFKVVAGADDKPMIVVSYKGQEKHI
SAEEISSMILTKMREIAEAYLESPVKNAVVTVPAYFNDSQRKATKDAGAIAGLNVMRIIN
EPTAAALAYGIDKRANCVGERNIFVFDLGGGTFDVSLLTIKGDVFEVKATAGDTHLGGED
IDNRMVNYFVEEFKRKSKVDISGNSRALRRLRTACERAKRTLSYAADTTIEVDALSGSID
FCSSITRARFEELNMGLFRKCMETVDRCLVDSKMDKNDIHDVVLVGGSSRIPKVQQLLQD
LFKGKDLCKSINPDEAVAYGAAVQAALLSKGIKYVPNLVLLDVTPLSLGISLKGDLMSVM
IPRNTTIPVKKKKVYYTNDENPTVVGIEVYEGERARDSDNNLLGFFNLSGFPPATCGQPL
DVCFSIDENGILSVSAEGKTNGNKNEITITNEKGRLSTEQIMRLIQEAEKYKAEDLKYQK
KVEAMNALDDYIYKIRNAIEDVDNSHEFHPQDKMKVNLAITKARNLLDAGQQTGTKVFED
YLKEVESLIEPIMRVS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaaataaggaatgggctgtaggaatcgaccttggcacaacatactcgtgt
gttgctgtatggcaagaacaacactgtcgagtggaggtcattcacaacgaccaaggcaat
agaaccacaccttcttgtgttgctttcacagacaaccaaagattgattggcaatgccgct
aagaatcaggctgccaccaacccaaccaacactgtctttgatgtgaaaaggttaattgga
agaagatatagtgatcccattattgagaatgacttaaggttgtggccattcaaggtcgtt
gctggtgctgatgacaaacccatgatagttgtttcatacaagggtcaggagaagcatatt
tcagctgaggaaatctcatctatgatccttacaaagatgcgcgagattgcagaagcatat
ttggaatcaccagttaagaatgcagttgttactgtgcctgcttatttcaatgactctcaa
cgtaaagccaccaaagatgctggtgccattgctggcctaaatgttatgcggataatcaat
gagcctacggctgcagcactagcatatggcattgacaagagagctaattgtgttggagag
cgaaatattttcgtctttgatcttggtggtggtacatttgatgtttctctgctcacaatt
aagggcgatgtctttgaagtcaaggccactgctggtgacactcaccttggaggagaggac
attgataacagaatggtgaactactttgtagaggagttcaagaggaagagcaaagtggac
attagtgggaactcaagagcactgaggaggttgagaactgcttgtgagagagcaaaaaga
acactctcatatgctgctgataccaccatcgaggtagatgctttatctgggagcattgac
ttctgttcatcaatcactcgtgcaaggtttgaggaactaaacatgggcctctttagaaag
tgtatggagacagtagataggtgtctcgttgattctaagatggacaagaatgatatacat
gatgttgtacttgttggtggttcttccaggatccccaaagtgcagcagctattgcaggac
ttgttcaaggggaaggatctgtgcaagagcatcaaccctgatgaggctgttgcttatgga
gcagcagtccaagccgctttgttgagcaaaggcatcaaatatgttcccaatctagtgcta
ttggatgttacaccactgtcacttggtatatcgctcaagggagatctcatgagtgttatg
attcctaggaacactaccattcctgtaaagaagaaaaaggtatactatacaaatgatgaa
aacccaaccgttgttgggattgaggtttatgagggtgagagagcaagagatagtgataac
aatttgctgggattttttaatctctctggttttcctcctgctacttgtggtcaacccttg
gatgtgtgcttttccatagatgaaaatggtatcttgtctgtttctgctgagggaaaaacc
aatggcaataagaacgagattaccataactaatgaaaagggaagactatcaactgaacaa
attatgagattgatccaagaagctgagaaatacaaggctgaagacctaaagtaccagaag
aaagttgaagcaatgaatgctttggatgattacatatacaagataaggaatgctatagag
gatgttgataacagtcatgagtttcatccacaagacaaaatgaaagtcaatttggcaatt
acaaaggccaggaatttacttgatgctggtcaacagacaggaacaaaggtgtttgaggat
tatctgaaagaggtagagagcctcattgaacccattatgagggttagctag
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integrated database retrieval system
