Castor canadensis (American beaver): 109678565
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Entry
109678565 CDS
T04791
Symbol
Slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04721
Synaptic vesicle cycle
ccan04724
Glutamatergic synapse
ccan05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
109678565 (Slc1a6)
04721 Synaptic vesicle cycle
109678565 (Slc1a6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109678565 (Slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccan02000
]
109678565 (Slc1a6)
Transporters [BR:
ccan02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
109678565 (Slc1a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
109678565
NCBI-ProteinID:
XP_020009656
UniProt:
A0A8B7TRN6
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSSQGNSLFLRESGQRLGRVGWLQRLPERLQQRALRARLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRVVTRTIVRTENGSELGASMSPPSSMENETSILENV
TRALGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYTPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPL
IYFLITHRNPFPFIGGMLQALITAVGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQQELDLQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcaaggcaacagcctgttcctgcgcgaaagcggccagcgcctgggccgggtg
ggctggctgcagcggctgcccgagcgcctgcagcagagagccctgcgcgcgcgcctgcgc
ctgcagaccatgacccgcgagcacgtgttgcgcttcctgcggcgcaacgccttcatcctg
ctcaccgtcagcgccgtggtcatcggggtcagcctggcatttgccctgcgcccttaccag
ctcacttaccgccagatcaagtacttctcctttcctggtgagcttctcatgaggatgctg
cagatgctggtgctacccctcattgtctccagtctggtcacaggtatggcgtctctggac
aacaaggcaacagggcggatggggatgcgggcagctgtgtactacatggtgaccacggtc
atcgcggtcttcatcggcatcctcatggtcaccatcatccatcccgggaagggctccaag
gaggggctgcaccgtgagggtcgcattgagaccatccccacagctgatgccttcatggac
ctggtcagaaacatgtttccacccaaccttgtggaggcctgcttcaaacagttcaagacg
cagtacagcacgagagtggtaaccaggaccatcgtgaggacggagaatgggtctgagctg
ggtgcatcgatgtctcctccatcctcgatggagaatgaaaccagcatcttggaaaatgtc
actcgggccttgggcaccctgcaggaggtgctgagctttgaggagactgtgcctgtgcct
ggttctgccaatggcatcaatgccctgggtcttgtcgtcttctctgtggcttttgggctg
gtcatcggtggcatgaaacacaaaggccgagtcctgagggatttcttcgacagcctcaat
gaggctattatgagactggtgggcatcattatctggtacacacctgtgggcatcctgttc
ctgattgccggtaagattctggaaatggaagacatggcagtccttggaggtcagctggga
atgtacacactgactgtcatcgtgggcttgtttctccatgctggcggtgtcttgcccctc
atctacttcctcatcacccatcggaaccccttccccttcattgggggtatgctgcaggcc
ctcattactgccgtaggcacctcttccagctctgcgactctgcccattaccttccgctgc
ctggaggagggcctgggtgtggaccgccgcatcaccaggttcgtgctgcctgtgggagcc
accgtcaacatggatggcaccgcactctatgaggccttggccgccatttttattgctcaa
gtcaacaactacgagctcaacttgggccagatcaccacaatcagcattacggccacagca
gccagtgttggggcggctggcattccccaggccggtctggtcaccatggtcattgtgctc
acgtctgttggcctgcctacagaagacatcacgctgatcatagctgtggactggtttctt
gaccggcttcgtacgatgaccaatgtgctgggagactcaattggagcagctgtcattgag
catctgtctcagcaggagctggacctgcaggaagctgagctcaccctccccagcctgggg
aagccctacaagtcactcatggcacaagaaaagggggcatccaggggccggggaggtaat
gagagtgccatgtga
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