KEGG   Castor canadensis (American beaver): 109681205Help
Entry
109681205         CDS       T04791                                 

Gene name
Setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan00310  Lysine degradation
ccan04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    109681205 (Setdb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    109681205 (Setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccan03036]
    109681205 (Setdb1)
Enzymes [BR:ccan01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     109681205 (Setdb1)
Chromosome and associated proteins [BR:ccan03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     109681205 (Setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109681205 (Setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 109681205
NCBI-ProteinID: XP_020011405
LinkDB All DBs
Position
Unknown
AA seq 1310 aa AA seqDB search
MSSLPGCIGLDAATAAVECEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSTQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPIVPPAPPAPPLSPQAGDNESLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSETVPGGKPGINQMYRSPLGSTTSAPAPTA
PPCPPVSEESPLGSTTSVSAPPALPGPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYT
CLSRIRPMRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEI
ERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTP
PPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINP
NSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLD
DIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVPCSSDSS
GVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSE
TASKDSRPPDLGPPHIPIPPSISGGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSR
SSFKTGEVGEGRTGGGRGEAEKASTSGLGIKDEGDIKQAKKEDSDDRNKISVVTESSRNY
NYNPSPMKPEGLRRPPSKTSMHQSRRLMASAQSNPDDVLTLSSSTESEGESGNSRKPTAG
QTSATAVDSDDIQTISSGSEGDEFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTN
MASVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHD
LRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3933 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctggctgcattggtttggatgcagcaacagctgcagtggaatgtgaa
gagattgcagagctgcaacaggcagtggttgaggagctgggtatctctatggaggaactt
cggcagttcattgatgaagaacttgaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaagagtctgaagtggctcatgttgaccag
ctctttgatgatgcttccagggcagtgactaattgtgagtctttggtgaaggacttctac
tcgaagctaggactacagtaccgtgacagtagctctgaggatgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtccttagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatca
gctcaagatgtccagaagttcatggatgctgttaacaagaagagtagtacccaagatctg
cataaaggaaccttgagtcaaatgtctggagaactgagcaaagatggtgacctgatagtc
agtatgcggattttgggcaagaagagaactaagacatggcacaaaggcaccctaattgct
atccaaacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtcgggaaaccatattgcatacgattatcaccctcctgctgacaagctgtatgtg
ggcagtcgagtggtggctaaatacaaagatgggaatcaggtctggctttatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtcagaactatatcccatttgccggccattgaaaaagact
tgggaggatatagaagacatctcctgcagagacttcatagaggaatatatcactgcgtac
cctaaccgtcccatggtgctgctcaagagcggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgtgttgaggaagtggatggcagcctagtcagaatcctcttcctg
gatgacaaaagatgcgagtggatctatcgaggctctacacggttggagccaatgttcagc
atgaaaacatcctcagcctctgcactagaaaagaaacaaggcgggcagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgttgtccaatacacacaggatttgacc
agtactggaacccagtttaagccagtggagcccccacagcccatagttccacctgcccca
cctgctccacctctgtctccccaagcaggtgacaatgaaagcttggaaagccagcttgct
cagtcacggaagcaggtagccaaaaagagtacatcattccgtccaggatctgtgggctct
ggtcattcctcccctacatcccctgcactcagtgaaactgtccctggtgggaaacctggg
attaaccagatgtacagatcacctttaggctcaacaacctctgccccagcacccacagct
cctccatgtcctccagtcagtgaagaatcacctttgggctctacaacctctgtttcagca
cctccagctcttccaggtccaccagccttccatggcatgctagagcgggccccagcagag
ccctcctaccgtgcccccatggagaagcttttctatttgcctcatgtctgcagctatact
tgtctgtctcggatcagacctatgagaaatgagcagtaccgaggcaagaaccctttgtta
gtcccactactatatgactttcggaggatgacagcccgacgccgagttaaccgcaagatg
ggctttcatgttatctataagacaccctgtggtctctgccttcggacaatgcaggagatt
gaacgttacctatttgaaactggctgtgacttcctctttctggagatgttttgtttggat
ccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggac
atcacctatggcaaagaagatgttcctctgtcttgtgttaatgagattgacacaaccccc
ccaccccaggtggcctacagcaaagagcgtatcccaggcaagggtgttttcattaacact
ggccctgaatttctggttggctgtgactgcaaggatggttgtcgggacaagtccaagtgt
gcctgccatcagctaactatccaggctacagcctgcaccccagggggccaaatcaaccct
aactctggctaccagtacaagagattagaagagtgtctaccaacaggggtttatgagtgt
aacaaacgctgcaaatgtgacccaaacatgtgcacaaatcggttggtgcagcatggacta
caggttcggctacagctatttaagacacagaacaagggctggggtatccgctgcttggat
gacattgccaaaggctcttttgtgtgtatttatgcaggcaaaatcctgacagatgacttt
gcagacaaggaaggcctggaaatgggtgatgagtactttgcaaatctggatcatatagag
agcgtggagaactttaaagaaggatatgagagtgatgttccttgttcctctgacagcagt
ggtgtagacttgaaggaccaggaagatggtaacagtggtacagaggaccctgaagagtcc
aatgatgatagctcagatgataacttctgtaaggacgaggacttcagcaccagttcagtg
tggcgcagctatgctacccgaaggcagactcgtggccagaaggaaaatggactatctgag
acagcttccaaggactcccgtcccccggaccttgggcccccacatattcctatccctccc
tcaatctctggagggggctgcaatccaccttcctctgaagaaacacccaagaataaggta
gcctcttggttgagctgcaatagtgtcagtgaaggtggatttgctgactctgatagccgt
tcatccttcaagactggtgaagttggggagggccggactgggggaggccgaggggaggct
gagaaggcctccacctcaggactgggcatcaaggatgaaggagacatcaagcaggccaag
aaagaggactctgatgaccgaaacaaaatatcagtagttactgaaagttctcgaaattac
aattataatccttctcccatgaagcctgaaggacttcgccgcccacctagtaagactagt
atgcatcagagccggcgactcatggcttcggcccagtccaaccctgatgatgtcctgaca
ctgtccagcagcacagaaagtgagggggaaagtgggaacagccgaaagcccactgctggt
cagacttcagccacagcagttgacagtgatgatatccagaccatctcctctggctctgaa
ggggatgaatttgaggacaagaagaacatgtctggtccaatgaagcgccaggtggcagta
aaatcaacccgaggcttcgctcttaaatcaacccatgggattgccatcaaatcaaccaac
atggcctctgtggacaagggggaaagtgcacctgttcgtaagaacacacgccaattctac
gatggtgaagagtcttgctacatcattgacgccaagcttgaaggcaacctgggtcgctac
ctcaatcacagttgcagccccaacctgtttgtccagaatgtcttcgtggatacccatgat
cttcgcttcccttgggtggccttctttgccagcaagagaatccgggctgggacagaactt
acttgggactacaactacgaagtgggcagtgtggaaggcaaggagctgctctgctgttgt
ggagccatcgaatgcagaggccgtcttctttag

DBGET integrated database retrieval system