Castor canadensis (American beaver): 109681474
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Entry
109681474 CDS
T04791
Symbol
Psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03050
Proteasome
ccan05010
Alzheimer disease
ccan05012
Parkinson disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05020
Prion disease
ccan05022
Pathways of neurodegeneration - multiple diseases
ccan05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
109681474 (Psmd1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
109681474 (Psmd1)
09164 Neurodegenerative disease
05010 Alzheimer disease
109681474 (Psmd1)
05012 Parkinson disease
109681474 (Psmd1)
05014 Amyotrophic lateral sclerosis
109681474 (Psmd1)
05016 Huntington disease
109681474 (Psmd1)
05017 Spinocerebellar ataxia
109681474 (Psmd1)
05020 Prion disease
109681474 (Psmd1)
05022 Pathways of neurodegeneration - multiple diseases
109681474 (Psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccan03051
]
109681474 (Psmd1)
Proteasome [BR:
ccan03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
109681474 (Psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN2_N
PC_rep
HEAT_2
HEAT
RRP12_HEAT
XRCC4
Motif
Other DBs
NCBI-GeneID:
109681474
NCBI-ProteinID:
XP_020011845
UniProt:
A0A8B7U2F8
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKQIDQRLEGIVNKMFQRCLDDHKYKQAVGIALETRRLDIFEKTVLESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDSMETE
DKTGNALVGKTPDVSPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcagcggctggaattatttctcttctggatgaagaagaaccacagcttaag
gaatttgcactacacaaattgaatgcagttgtcaatgacttctgggcagaaatttctgag
tctgtagacaaaatagaagttttgtatgaagatgaaggtttccggagtcggcagtttgca
gccttggtggcatctaaagtattttatcacctgggggcttttgaggagtctctgaattac
gctttgggagcaggtgacctcttcaatgttaatgataactcagaatatgtggagactatt
atagcaaaatgcattgatcactataccaagcagtgtgtggagaatgcagatttgcctgaa
ggagaaaagaaacaaattgaccagagattggaaggcatcgtgaataaaatgttccagcga
tgtctagatgatcacaagtataagcaggctgtcggcattgctttggaaactcggagacta
gacatctttgagaagaccgtactggagtcgaatgatgtcccaggaatgctagcgtatagc
ctcaagctctgcatgtctttaatgcagaataaacagtttcggaataaagtactaagagtt
ctggttaaaatatacatgaacttggagaaacctgatttcatcaatgtttgtcagtgctta
attttcttagatgatcctcaggccgtgagtgatatcttagaaaaactggtgaaggaagac
aaccttctgatggcttatcagatttgttttgatttatatgaaagtgctagccagcaattt
ttgtcatctgtaatccagaatcttcgaactgttgggactcctattgcttctgtgcctgga
tccaccaatacgggtactgttccaggatcagagaaagacagtgactcaatggaaacagaa
gataagacaggcaatgcactggtaggaaaaacccccgatgtgagtccagaacccaaggac
cagactttgaaaatgattaaaattttaagcggtgaaatggctattgagttacatctgcag
ttcctaatacgaaataataatacagacctcatgattctaaaaaacacaaaggatgcagta
cgaaattctgtatgtcacacagcaactgttatagcaaactcttttatgcactgtggaact
accagcgaccagtttcttagagataacttggaatggttggccagagccactaactgggca
aaatttactgctacagccagtttgggtgtaattcataagggtcacgagaaggaagcatta
cagttaatggcaacataccttcccaaagacacttctccaggatcagcctatcaggaaggt
ggaggtctttatgcattgggtctcattcatgccaatcatggtggtgacataattgactat
ctgcttaatcagctcaagaatgccagcaatgatatcgttcgacatggaggcagtctgggc
cttggtttggctgccatgggaaccgcacgccaggatgtgtatgatttgttgaaaacaaac
ctttaccaggatgatgcagtgacaggagaagcagctggcctggctctaggtttggttatg
ttgggctctaaaaatgcccaggctattgaggacatggttggctatgcacaagaaactcaa
catgagaagattctgcgtggtcttgcagttggcattgcattagtgatgtatgggaggatg
gaagaggctgatgctctcattgaatctctctgtcgtgataaggatccaattcttcgaagg
tctggaatgtatactgtagcgatggcttattgtggctctggtaacaacaaagctattcga
cgcctgctacatgttgctgtaagtgatgttaatgatgatgtcaggagggcagcagtagaa
tcacttgggttcattctattcaggtaa
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