Castor canadensis (American beaver): 109688189
Help
Entry
109688189 CDS
T04791
Symbol
Shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan00260
Glycine, serine and threonine metabolism
ccan00630
Glyoxylate and dicarboxylate metabolism
ccan00670
One carbon pool by folate
ccan01100
Metabolic pathways
ccan01200
Carbon metabolism
ccan01230
Biosynthesis of amino acids
ccan01240
Biosynthesis of cofactors
ccan01523
Antifolate resistance
Module
ccan_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
109688189 (Shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109688189 (Shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109688189 (Shmt1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
109688189 (Shmt1)
Enzymes [BR:
ccan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
109688189 (Shmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
109688189
NCBI-ProteinID:
XP_020022069
UniProt:
A0A250Y1R2
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAAPINKAHKDAILWSSHDKMLVQPLKDSDAEVYEIIKKESNRQRVGLELIASENFASRA
VLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPDTGY
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADESGAYLMADMAHISGLVAAGV
VPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKEILYELESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTAEFKVYQLQVVANCRALAEALTELGYKIVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFKK
VAHFIHRGIELTLQIQNDMNMRATLKEFKEKLAGDEKYQMAVRALREEVESFASAFPLPG
LPDI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccaatcaacaaggcccacaaggatgctattctctggtcctcccatgataag
atgctggtgcagccccttaaggacagcgatgcggaggtttatgagatcattaagaaggaa
agtaaccggcagagggttggattggagctgattgcctcagagaattttgccagccgagca
gtgttggaggccctgggctcttgcttaaataacaaatactctgaggggtacccagggcag
aggtattacggtgggactgagtttattgatgagctggagacactgtgtcagaagcgagcg
ctgcaagcctatcacctggaccctcagtgctggggggtcaatgtccagccctactcaggt
tcccctgccaacttcgcagtgtacactgccttggtagagccccatgggcgcatcatgggc
ctggacttacctgatgggggccacctgacccatgggtttatgacagacaagaagaagatc
tctgctacatccatcttctttgaatctatgccctataaggtgtacccagacactggctac
atcaactatgaccagctggaggagaacgcccgccttttccacccaaaactgatcatcgca
ggaaccagctgctactctcgcaacctggactacgcacgcctgcggaagatcgcagatgag
agcggggcctatctcatggcggacatggcacatatcagtgggctggtggcagctggcgtg
gtgccctcgccttttgaacactgccatgtggtgaccaccacaacacacaagaccttgaga
ggctgccgtgccggcatgatcttctacaggaaaggtgttcgcagtgtggatcccaagact
ggcaaagagattctgtatgaactggagtcactcattaactctgctgtgttcccaggcctg
cagggtggtcctcacaaccatgccattgctggggttgctgtggccctgaagcaagcaatg
actgcagaattcaaagtctaccagctccaggttgtggccaactgcagggctctggctgag
gccctcacagagctgggctacaagatagtcacaggtggttctgacaaccatttgatcctt
gtggatctccgttccaagggcacagatggtggaagggctgagaaggtgctagaagcctgt
tctattgcctgcaacaagaatacctgcccaggtgacaggagcgcactgcggcccagcgga
ctgcgactggggaccccagcactgacatctcgaggacttttggaaaaagacttcaaaaaa
gtagcgcactttatccacagagggatagagttgactctgcagattcagaatgacatgaac
atgagggccacactgaaggaattcaaggagaaactggcaggggatgagaagtaccagatg
gctgtgcgggctctccgggaggaagtagagagcttcgcttctgccttcccgctgcctgga
ctgcctgacatctga
DBGET
integrated database retrieval system
