KEGG   Castor canadensis (American beaver): 109693457Help
Entry
109693457         CDS       T04791                                 

Gene name
Sdha
Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial isoform X1
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan00020  Citrate cycle (TCA cycle)
ccan00190  Oxidative phosphorylation
ccan01100  Metabolic pathways
ccan01200  Carbon metabolism
ccan04714  Thermogenesis
ccan04932  Non-alcoholic fatty liver disease (NAFLD)
ccan05010  Alzheimer disease
ccan05012  Parkinson disease
ccan05016  Huntington disease
Module
ccan_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ccan_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ccan_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    109693457 (Sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    109693457 (Sdha)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    109693457 (Sdha)
 09160 Human Diseases
  09164 Neurodegenerative diseases
   05010 Alzheimer disease
    109693457 (Sdha)
   05012 Parkinson disease
    109693457 (Sdha)
   05016 Huntington disease
    109693457 (Sdha)
  09167 Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    109693457 (Sdha)
Enzymes [BR:ccan01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     109693457 (Sdha)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 Pyr_redox_2 GIDA FAD_binding_3 DAO
Motif
Other DBs
NCBI-GeneID: 109693457
NCBI-ProteinID: XP_020030374
UniProt: A0A250Y443
LinkDB All DBs
Position
Unknown
AA seq 665 aa AA seqDB search
MAGVGAVSRLLRTRRLSLVVGQWPATFQTRSRGFHFTVGGSKRASAKVSNAISTQYPVVD
HEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNW
RWHFYDTVKGSDWLGDQDAIHYMTEQAPASVIELENYGMPFSRTEDGKIYQRAFGGQSLK
FGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECHGVIALCI
EDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTG
IYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTVEIREGRGCGP
EKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKG
QVLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSITESCRPGD
KVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRTGSLLQEGCEKI
SQLYGDLKHLKTFDRGMVWNTDLVETLELQNLLLCALQTIYGAEARKESRGAHAREDHKV
RVDEYDYSKPIQGQQKRPFGEHWRKHTLSCVDIKTGKVTLEYRPVIDKTLNETDCATVPP
AIRSY
NT seq 1998 nt NT seq  +upstreamnt  +downstreamnt
atggcgggggttggggctgtgtcgcggctgctccgcacccggcgcttgtcgttggtggtt
gggcagtggcctgcaacattccaaacacgaagccgtggctttcacttcactgttggtggg
agtaaaagggcatctgctaaagtttcaaatgcaatttctacgcagtatccagtagtggat
catgaatttgatgcagtggtggtaggtgctggaggggcaggcttgcgagcagcatttggc
ctttctgaggcagggtttaataccgcatgccttacaaagctttttcctacccggtcacac
actgttgcagcacagggagggatcaatgctgctctggggaacatggaagaggacaactgg
aggtggcatttctacgacaccgtgaagggctctgattggctgggggaccaggacgccatc
cactacatgacagagcaggcccctgcctctgtgattgagctagaaaattatggcatgcca
tttagcaggactgaagatgggaagatttatcagcgtgcatttggtggacagagcctcaag
tttgggaaaggtgggcaggcccaccggtgctgctgtgtggctgatcggacaggccactcg
ctcttgcacaccttgtatggaaggtctctgcgatatgacaccagctattttgtggagtat
tttgccttggatctcctaatggaaaatggggagtgccatggtgtcattgcattgtgcata
gaggatgggtccatacatcgtataagagcaaagaacactgttattgctaccggaggttat
gggcgaacctacttcagctgcacatctgcccataccagcacaggggatggcacagccatg
attaccagggctggcttgccttgtcaggacttagaatttgttcagttccaccccacaggc
atatatggtgctggctgtctcatcacagaaggatgccgcggagagggaggtattctcatt
aacagtcagggtgaaaggttcatggagagatatgcccctgttgcaaaggacctggcctcc
agagatgtcgtgtctcggtccatgactgtagagatccgtgaaggaagaggctgtggccct
gagaaagatcatgtctacctgcagttgcatcacctgccccctgagcagctggccacacgc
ctgcctggcatttcagagacagccatgatcttcgctggcgtggatgtcaccaaggagccg
atccctgtcctccccactgtgcattacaacatgggtgggattcccaccaactacaaaggg
caggtgctgaagcatgtgaacggccaggatcagatcgtgcctggcctatatgcctgtggc
gaggctgcatgtgcttcagtacatggtgccaaccggctgggggcaaactccctcttggac
ctagtagtctttggccgggcctgtgctctgagcatcacggagtcttgcagacctggagat
aaagttcctccaattaagccaaatgctggagaagaatctgtcatgaatcttgacaaattg
agatttgctgatggaagcatcagaacatcagaactgcgcctcagcatgcagaagtcgatg
cagaatcatgctgcagtgttccgtactggaagcttgctgcaagaaggctgtgagaaaatc
agccagctctatggagacctgaagcacctgaagacatttgacaggggaatggtctggaac
acagacctggtggagaccctggagctacagaacttactgttgtgcgcgctgcagacaatc
tatggtgcagaagcgcggaaggagtcacggggtgctcatgccagggaagatcataaggtg
cgagttgatgagtacgattactccaagcccatccaggggcagcagaagaggccatttgga
gagcactggaggaaacacaccctctcgtgtgtggacatcaagacagggaaggtcactctg
gagtacagacctgtcatagacaagaccttgaatgagacagactgtgccacagttcccccc
gccattcgctcctattga

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