Clavibacter capsici: AES38_12660
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Entry
AES38_12660 CDS
T05227
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccap
Clavibacter capsici
Brite
KEGG Orthology (KO) [BR:
ccap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccap03032
]
AES38_12660
03400 DNA repair and recombination proteins [BR:
ccap03400
]
AES38_12660
Enzymes [BR:
ccap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AES38_12660
DNA replication proteins [BR:
ccap03032
]
Prokaryotic type
DNA Topoisomerases
AES38_12660
DNA repair and recombination proteins [BR:
ccap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AES38_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALD13650
UniProt:
A0A0M4H1T5
LinkDB
All DBs
Position
complement(2697876..2698844)
Genome browser
AA seq
322 aa
AA seq
DB search
MVRLRRSDATGKGYTRKRSGKGWTYLDSDGNRVTDRELRARMEHLGIPPAWTDVWIAPYA
NGHVQATGMDSAGRRQYIYHPTWREQKDRIKFDRALQLAESLPAARRQVTMHLRQEGHTR
ERALAAGFRMLDTGSLRVGSERYAESNGSHGLSTLLCSHVTIHGDSVHLEFPAKSGQEWS
SDIRDADLVQAIQGLKRRGANARLLAYRDGSDWHPLGAADINDYVRERTGGEFTAKDFRT
LHGTVAAAISLAKHGPEETKGKRQRALAQAYRDASEVLSNTPTIAKNSYVDPRLVDEYVH
GRTIDPQRLGSGETELRNLLYR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtaagactccggcgcagcgacgccaccggcaagggctacacgcgcaagcgctcgggg
aagggctggacctacctggactccgacgggaaccgggtcaccgaccgggagctgcgcgcc
cgcatggagcacctcgggatcccgcccgcctggaccgacgtgtggatcgccccgtacgcc
aacggccacgtgcaggcgacgggcatggacagcgccggacgccggcagtacatctaccac
ccgacctggcgcgagcagaaggaccggatcaagttcgaccgcgcgctgcagctcgccgag
tccctcccggccgcgcgacgccaggtcaccatgcacctccggcaggaggggcacacgcgc
gagcgcgcgctggccgccggcttccgcatgctcgacacggggagcctccgcgtcggcagc
gagcggtacgcggagtcgaacggcagccacgggctctcgacgctgctgtgctcccacgtg
accatccacggcgacagcgtccacctcgagttccccgcgaagagcgggcaggagtggtcg
agcgacatccgtgacgcggacctcgtccaggcgatccagggcctcaagcgccggggtgcg
aacgcgcgcctcctcgcctaccgggacgggagcgactggcacccgctcggcgcggcggat
atcaacgactacgtgcgcgagcgcaccggcggcgagttcaccgccaaggacttccggacg
ctccacggcacggtcgccgcggcgatcagcctcgcgaagcacgggcccgaggagaccaag
ggcaagcggcagcgggcgctcgcgcaggcgtaccgcgacgcgtccgaggtgctgagcaac
accccgaccatcgcgaagaacagctacgtggacccgcggctcgtggacgagtacgtgcac
ggccgcaccatcgacccgcagcgcctcggctcgggggagacggagctccggaacctgctc
taccggtga
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integrated database retrieval system
