Cyprinus carpio (common carp): 109052908
Help
Entry
109052908 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04145
Phagosome
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109052908
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109052908
09144 Cellular community - eukaryotes
04510 Focal adhesion
109052908
09142 Cell motility
04820 Cytoskeleton in muscle cells
109052908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109052908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109052908
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109052908
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Phagocytosis
Opsonins
109052908
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109052908
Exosomal proteins of colorectal cancer cells
109052908
Exosomal proteins of bladder cancer cells
109052908
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109052908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_1
TSP1_spondin
VWC
TSP1_ADAMTS
TSP_3
EGF_3
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
109052908
NCBI-ProteinID:
XP_018925886
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MILRRNFYLLPLLLQCIRALPQDGHVEDESIFDLFKISSISRKTIGAKLFKGHDWDSPAY
RFIRFDHIPAVSPPALHQILKQVQNNEGFVFVATIRQDKGSRGTLFGLEGPSGSRQFEIV
SNGRANTLDLVYMVEGSQNVVSFEDVDLSDSQWKNITLYVHGEXANLYVGCSLIDSVILD
EPFYEHLQPEGSQMFVAKGSIRENHFRGLLQNVQFLFDTPIENILRNKGCEIAKPEEVNV
VNESTETVSVGTAISTNFIDRRRKYYEVSKKLNVVNESTETVSVGTAISTNFIEQKEKIA
SDVCERSCEELTNMVQELKGLRIVVGNLIDGLQKVTEENTVMKEVLGNMKNIKDKRMCWQ
DGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCPPVSCASPTFLDGECCPLCLPKDSEDG
WSPWSEWTECTVTCGTGTQQRGRSCDATSNPCSGPSIQTRRCNLGKCDSRVRQDGGWSLW
SPWSSCSVTCGEGQITRIRHCNSPVPQLGGKDCEGSGRETKKCEAKPCPIDGAWGPWSPW
AICSATCGGGTRTRTHVCNSPHPQYGGKKCPGESKDTASCNKQDCPVDGCLSNPCFGGVD
CTSSPDGSWECGPCPVGFRGNGTFCEDVNECDMVPDLCFKNGGSQRCVNTDPGFHCLPCP
PRYKGNQPFGMGVEAAKLNKQECEQENPCKDKTHNCHRSAECIFFDHFSDPMFKCECKIG
YAGDGLICGEDSDLDGWPNQNLVCGANQSYHCKRLPYCVGGKMETGYSRRSKLSGDGRGD
VCKDDFDNDNIPDILDVCPENDAIGNTDFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQ
TANSDPGIAVGFDEFNAVDFSGTFYVNTDRDDDYAGFVFGYQSSSRFYVVMWKQITQTYW
EVNPSKALGISGVSLKVVNSTTGTGEHLRNALWHTGDTPGQVRTLWHDPKNIGWKDYTAY
RWHLIHRPKTGFIRVVVYEGKQIMADSGPVYDKTFAGGRLGLFVFSQELVYFSDLKYECR
DK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagaaatttctacttgctgcctttgctgttacagtgcatcagagcacta
cctcaagatggccatgtggaagatgaatccatcttcgaccttttcaaaatcagcagcatc
agcagaaagacgattggtgccaagctcttcaagggccacgactgggactcacctgcatac
cgctttatccgctttgatcacatccctgctgtgagccccccggccctccatcagatccta
aagcaggtccagaacaatgaggggtttgtgtttgtggccaccatacgacaagacaagggc
tccaggggaaccctgtttggtctggagggtcccagtgggagccgtcagtttgagattgtg
tccaacgggcgggccaacacactggatctggtctacatggttgagggatctcagaatgtg
gtgtcctttgaggatgtggacttgtctgattcacagtggaagaacattacgctgtacgtt
catggagagnacgctaacctttatgtaggatgtagcctcattgacagtgtgatcctggat
gagcctttctatgagcatctgcagccagagggcagtcagatgtttgtggccaagggatct
atccgggaaaaccacttcaggggcttactacagaatgtacagttcctttttgacacacct
atagagaacatcctgagaaacaaaggttgtgagatcgccaaacctgaagaagttaacgtg
gttaatgagagtacagagactgtgtctgtcggtacggccatctccaccaacttcattgac
agaaggagaaaatactacgaggtctccaagaagttaaacgtggttaatgagagtacagag
actgtgtctgtcggtacggccatctccaccaacttcattgaacagaaggagaaaatagca
tcagacgtgtgcgaacgttcctgtgaggaactcaccaacatggtccaggagctcaaaggt
ctccgtattgttgtgggcaatctcatcgatggcttgcagaaagtgactgaggagaacact
gtgatgaaggaggtgctggggaacatgaagaacatcaaagacaagcgcatgtgctggcaa
gacggccgtctctttgaggataaggaggactgggttgtggacagctgcactaaatgtacc
tgtcaggaatcaaagattgtatgccatcagatcacatgtcctccagtatcctgtgccagc
ccaactttcctggatggtgaatgctgtccattgtgtctgcctaaagatagcgaggatggc
tggtctccttggtctgaatggacggagtgtaccgtcacatgtggaacaggcacccagcaa
agaggcaggtcatgtgatgccacaagtaacccctgcagtggcccctccatccaaacccgc
agatgcaacttgggaaaatgcgacagtcgtgtccgtcaagatggtggttggagtttgtgg
tccccctggtcatcatgctctgtgacgtgtggagagggacagatcacgcgaatacgccac
tgtaactcccccgtccctcagctgggaggaaaggactgtgagggcagcgggagagagacg
aaaaaatgtgaagccaaaccctgtccaattgatggagcctggggcccatggtctccttgg
gcaatctgctctgctacctgtgggggaggaacaaggacacgaacacatgtgtgtaacagc
cctcatccacagtatggcggcaagaaatgcccaggagagtccaaggacactgcttcctgc
aacaaacaggactgccctgttgatggttgcctatctaacccgtgcttcgggggtgttgac
tgcaccagttcccctgatggctcgtgggagtgcgggccctgccctgtcggtttccgtggc
aatggaacattctgtgaggatgtgaatgagtgtgacatggtgcctgatctttgttttaaa
aacggtggatcccagcgctgtgtcaacacagacccaggattccactgcttgccttgccct
cctcgatacaaaggcaatcagccctttggaatgggagtggaggctgccaagcttaataaa
caggagtgtgagcaagaaaacccctgcaaagacaagactcacaactgccacaggtccgct
gagtgcatattctttgaccacttcagtgaccccatgtttaaatgcgagtgtaagatcggc
tatgctggggacggcctcatctgcggcgaggactctgaccttgatggttggcccaatcag
aacctggtgtgtggagccaaccagtcctatcactgtaaaaggctaccttattgtgttggt
gggaaaatggaaacaggttacagtcggaggtcgaagttgtcaggggatggaagaggcgat
gtctgcaaagatgattttgacaatgacaacattccagacattttggatgtgtgccctgag
aacgacgccatcggtaacactgacttccggaagtttcagatggtgcatttggaccccaaa
ggaactacacaaattgatcccaactgggtggtcagacatcagggcaaagagttggttcag
actgccaattctgaccctggtattgctgtgggtttcgatgagttcaacgctgtggatttc
agtggcactttctacgtcaacactgacagagatgacgattatgctgggtttgtgtttggc
tatcagtccagcagtcgattttatgtggtaatgtggaagcagataactcagacgtactgg
gaagttaatccttcaaaagcccttggtatctctggagtttctctgaaagtggtcaactct
accacgggcacaggggagcacctgcgtaatgccctgtggcacaccggtgacactcctgga
caggtccgcactctgtggcacgaccctaagaatatcggctggaaggattacactgcgtac
aggtggcatctcatccacagacccaagacaggattcatcagagtggtggtttatgagggg
aaacagatcatggcagactcggggccggtttatgataaaacctttgcaggagggagatta
ggactgttcgtgttttcccaagaactggtttacttctctgatctcaagtacgagtgtcga
gataaatga
DBGET
integrated database retrieval system
