Cyprinus carpio (common carp): 109064728
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Entry
109064728 CDS
T05134
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109064728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109064728
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109064728
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
HECT type E3
109064728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Glyco_hydro_129
Motif
Other DBs
NCBI-GeneID:
109064728
NCBI-ProteinID:
XP_018937310
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVLEPRKCEFFEGKRVRDVGCGRRHSVFLLEDGTVYTCGC
NDLGQLGHDKARKKPGRSVIYLHDITAVFLLSLLRTVKSLSEVHIAQVACGYWHSLALAR
GGQIFSWGQNKYGQLGLGMQGAGVSSPQVVQSLQGVPFAQISAGGSHSFGLTLSGAVFGW
GSNKFGQLGLSENDDRHFPALLKALRSQRVVYICCGEDHTAALTKEGGVFTFGAGGYGQL
GHNTTNHEVNPRKVFELMGNVVTQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTYN
RMSPAPVKGCWRAHTDPVPMDVEVEQSFCVKRIYAGGDQSFAHYALSQDDSPPVDLRITR
PDGQIYTLSNDLIQKWLNHGHGRLSPEITNEIDLVFSSANCLNGSFLSGSNPDHYNTNSK
CSGVDVNMARLLYHRLIQPDYPQVSQIVAASMEKHLLPRLSSSPPDIEALRLYLTLPECP
LLSDPSNYTTLTIPFAKAIVSLKDAPRKVLGNWWSKFEPAVFQRLVELYKEVVVYLLRMQ
KLGIPLSEQRIFTCFLHTSLKFLEILHSVNERAGQIIQYDKFYIHELDELIDIRNDYVTW
FQQQMFSVVMDSQVTMCKYPFVFDAQAKTALLQTDAVIQMQMAVDQAQRQNLHSLFVSGG
GVESVNPCLILIVRRENVVGDSMEVLRKSKNVHYKKPLKVMFVGEEAVDAGGVRKEFFLL
IMKELLDPKYGMFRYYEESRLIWFAHKTFEDIDLFHLIGVVCGLAIYNLTIVELNFPLAL
YKKLLKKTPTLEDLKELMPDVGRSLQQLLDYTEDDLEEMFCLNFTITEEIFGTTEVLELV
PNGTDISVNKSNRQEFVNAYVDYIFDTSVAPQFSAFYAGFHKVCGGKVLELFQPSELQAM
VIGNTNYDWKELEKSTEYKGEYWADHPTIKMFWEVFHELTLEKKKQFLLFLTGSDRIPIL
GMKSLALVIQPTGGGEQYFPVAHTCFNLLDLPKYTNKETLKEKLLHAIEHIQGFNLV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcctcgtacggacagctgggtttgggtgggattgatgaggag
atagtgctggagccgaggaaatgcgagttctttgagggcaagcgtgtgagggatgtggga
tgcggcagacgtcacagcgtctttctgctggaggacgggacggtgtacacctgcggctgc
aatgacctgggacagctggggcatgacaaagcacgcaagaaaccaggtaggtctgtgatc
tacctgcatgacataactgctgtgtttttgttgtctcttctcagaactgtcaagagtttg
tctgaggttcacattgcccaggtggcctgtggatattggcattcccttgctttagccaga
ggaggtcagatattctcctggggccaaaataaatacggacagctggggctcggaatgcag
ggcgccggcgtctcctccccacaagtcgttcagtctttgcagggcgtcccatttgcccag
atatctgcagggggctctcacagcttcgggctcacgctgtccggggctgttttcggctgg
gggagtaacaagttcggccagctgggcctcagcgagaatgatgatcgccatttccctgcc
ttgctgaaggctctcaggtcccaacgggttgtttacatctgctgtggagaggaccacacg
gcggcactaacgaaggagggaggtgtgtttacatttggagcaggtggttacggtcagctg
ggacacaacaccacaaaccatgaggtgaaccccaggaaggtgtttgagctcatggggaac
gtggttacacagatagcttgtggtaggcagcacactttggcgttcatcccttcatcagga
aagattgactcgtttggtctcggcggtaacgggcagctaggaacccgctcgacctacaat
aggatgagtcctgctcctgtgaagggctgctggcgagcccacactgatcctgtgcctatg
gatgtagaagtggagcagagtttctgtgtgaagaggatctacgctggaggagaccagagc
ttcgctcactacgctttatctcaggacgacagtcctccagttgatctgaggataaccaga
cctgatggacagatatacacgctcagcaatgacctcatccagaaatggctcaatcacggc
catgggagactatcaccagaaatcaccaatgagattgatcttgtgttctcttcagcgaat
tgtctcaacggaagctttctctctggaagtaatccagatcactacaacactaacagtaag
tgctcaggtgtggacgtcaacatggctcgcctgctctaccacagactcatccagcccgat
tacccacaagtctcacagattgtagctgctagtatggagaagcatctcctccccagactg
agcagttctcctccagacatcgaggctctaagactctacctcacgctgcccgagtgtccg
ctcctcagcgaccccagcaactacaccaccctcactattcccttcgccaaggccatcgta
agcctgaaggacgcccccagaaaagtgcttggaaactggtggtcaaagtttgagccagcg
gtcttccagaggctggtggagctctataaagaggtggtggtgtatctactgcggatgcag
aaactgggaattcctctttctgaacagaggatcttcacctgcttcctgcacacctcactc
aagttcctggagatcctccactcggttaatgagcgtgctggccagatcatccagtatgac
aagttttatattcatgagctggatgagctcattgacatcagaaatgattatgtcacctgg
tttcagcagcagatgttctctgtggtcatggactctcaggtgaccatgtgcaaataccca
tttgtttttgacgctcaggcgaagacggcgctgcttcagactgatgctgtgatccagatg
cagatggcggtggatcaggctcagagacagaacttacactctctgttcgtgtccggcgga
ggagtggagtcagtaaacccctgcctcatcctcatcgtacgccgagaaaacgtggtcgga
gactccatggaggtgctgaggaagtccaaaaacgttcattacaagaagccgctcaaggtg
atgtttgtgggagaggaggccgtggacgctggcggcgtgagaaaagagttcttcctgctc
atcatgaaagaactcttggaccctaaatatgggatgttcagatactacgaggagtccaga
ctcatctggttcgctcacaagacatttgaagacattgacttgttccatctgatcggtgtg
gtctgcggattggccatctataacctcactatagtggagctgaacttcccgctagcgctg
tacaagaaactcctgaagaaaactcccaccctagaggacctgaaggagctcatgcctgat
gtagggaggagtcttcagcagctgctggattatacggaggatgatttggaagaaatgttt
tgcctgaatttcacaatcacagaggaaatttttggcaccacggaggtattggagctggtt
cccaatgggacggacatcagtgtcaacaagtccaacaggcaggagttcgtcaacgcctac
gtcgattatatattcgacacctccgtggctcctcagttcagcgctttctacgcgggattt
cacaaagtgtgtggagggaaagttctagagcttttccagcccagtgaactgcaggccatg
gtcataggaaacaccaattatgactggaaggagctagagaagagcacggagtataagggc
gagtactgggcggatcaccccaccatcaagatgttctgggaagtgtttcacgagctaact
ttggagaagaagaaacagttcctgctgttcctcacgggcagcgaccgaatccccatcctg
ggcatgaagagcctggcgttagtgatccagcccaccggtggaggagagcagtatttccct
gtagcgcacacatgcttcaacctgctggatctgcccaagtacactaataaggagacactc
aaagagaaactgctgcacgccatcgaacacatccagggcttcaacctcgtctga
DBGET
integrated database retrieval system
