Cyprinus carpio (common carp): 109065757
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Entry
109065757 CDS
T05134
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar00100
Steroid biosynthesis
ccar01100
Metabolic pathways
Module
ccar_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109065757
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccar01006
]
109065757
Enzymes [BR:
ccar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109065757
Prenyltransferases [BR:
ccar01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109065757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
GBP_C
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
109065757
NCBI-ProteinID:
XP_018938310
UniProt:
A0A8C2FAJ0
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MELAAREFQLTCSEKRPHKHTGEMDILKSLGHPEEIINLFKYKIGGCRSVMPKLDYDSMS
ETLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMSIPLEKKVPLL
QDFHMFLYQPEWSFSESREKDRQVLEDFPTISVEFRNLGQEYRDVISDICHRMGVGMAEF
LEKKVSSMKEWDKYCHYVAGLVGIGLSRLFSASQLEDAEVGRDTELANSMGLFLQKTNII
RDYLEDQQEGRAFWPQEAWSQFASRLEDFASPQHLSSALSCLNLLVTDALHHVPDVIAYL
SRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATNMGAVQSI
IAQYSQEILQKVSAADPSREKTLRILSLIHEKSLSPAALSSRAHHISPVYAVSYTHL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaattagcagcgcgtgaatttcagctcacctgttcagaaaagcgtcctcataaacac
acgggcgaaatggacatcctcaagtctctaggacacccggaagaaataatcaacctcttt
aaatacaaaataggaggctgtcgttctgttatgcctaaactggattatgactccatgagc
gaaaccctgcggacctgctacgcgtatctgaaccagaccagccggagcttcgcggcggtg
atccaggccctggacggagagctgcggcatgctgtgtgtattttctatctggttctgcga
gctctggacacagtggaggacgacatgagcatcccgctggagaagaaggtcccgttgctg
caggacttccacatgttcctctatcagcccgagtggagcttcagcgagagcagagagaag
gaccggcaggtgctggaggatttccccacgatttcagtggagttcaggaatttgggccag
gagtatcgtgacgtgatttcagacatctgtcaccggatgggtgtgggaatggccgaattc
ctggagaagaaggtttcctccatgaaggagtgggacaagtactgtcattacgtggccggt
ctggtggggatcggactgtcccgtctgttctcggcgtcccagctggaggacgctgaggtg
ggccgggacacggagctggcgaactccatgggtctgttcctccagaagaccaacatcatc
agggactatctggaggaccagcaggagggaagggccttctggccgcaggaggcctggagt
cagtttgcgtcccgtctggaggatttcgcaagtcctcaacacctgagctctgctctgtcc
tgcctcaacctgctggtgaccgatgctctccatcacgtcccagacgtcatcgcatatctg
tcccgcctccgcaaccagagcgtcttcaacttctgtgccattcctcaggtgatggcgata
gcgacactgtcggcgtgctacaacaatcctcaggtgtttcagggtgtggtgaagatccgg
aagggtcaggccgtgacgctcatgatgcaggccacgaacatgggcgccgtccagagcatc
atcgctcagtacagtcaggagatcctgcagaaagtgtccgccgcggatccgtctcgagag
aagacgctgcgcatcctgagcctcatccatgagaagagcctgtctccagccgcgctctcg
tcccgagcgcaccacatctctcccgtctacgctgtctcttatacacatctctga
DBGET
integrated database retrieval system