KEGG   Cyprinus carpio (common carp): 109066138
Entry
109066138         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04010  MAPK signaling pathway
ccar04137  Mitophagy - animal
ccar04141  Protein processing in endoplasmic reticulum
ccar04210  Apoptosis
ccar04217  Necroptosis
ccar04621  NOD-like receptor signaling pathway
ccar04622  RIG-I-like receptor signaling pathway
ccar04920  Adipocytokine signaling pathway
ccar05132  Salmonella infection
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109066138
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109066138
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109066138
  09143 Cell growth and death
   04210 Apoptosis
    109066138
   04217 Necroptosis
    109066138
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109066138
   04622 RIG-I-like receptor signaling pathway
    109066138
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    109066138
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109066138
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109066138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109066138
   04121 Ubiquitin system [BR:ccar04121]
    109066138
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109066138
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     109066138
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    109066138
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF SlyX Rootletin zf-RING_6
Other DBs
NCBI-GeneID: 109066138
NCBI-ProteinID: XP_018938673
LinkDB
Position
Unknown
AA seq 501 aa
MAAQEPXPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCFYCFNR
TVGSGPQKCNACIKEDIFEEPTSILVQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFRNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDLSVEKEKIHDHERACA
HEHLNLLLHYIMGMKLQLHSEKTKVADLGRRCQELEVKAGTFEDVVCVLNREVERFATTM
EASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEMEGRLREMSATTFDGVFIWRISD
FTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGTSDA
LLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQRPVSDMNIASGCPLFCPLSKLEG
KNSYIRDDTIFIKAIVDLTGL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggctgctcaagaacccntccccccgtcctccatggagaacaataagccagggttccca
aagaagattttggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgagaagaccgttccaagcgcagtgcggccatcgcttttgtttttactgcttcaaccgg
actgttggatctggaccgcagaaatgtaatgcctgtatcaaggaggacatcttcgaagag
cccacgtcgatcctcgtacaaggatgcgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtgtgcttcaacgaaggctgttcctggaaaggcagtattaaagat
tatgagttgagccatgaggggaagtgtgagttcatgattctgccgtgtcccttgtgcaaa
gagctcattagactgaacgaacaggagcgtcataatgaacgcgagtgtcctgagagaacg
ctcaactgcaagtactgcaaagagccatttcacttcagaaacatcaaggcccatgatgag
atctgtcctaaatatcctatgatttgtgaaggatgtgcgaagaagaaaatccccagagaa
aagtatgttgaccacatcaagttctgcagcaagttcaggactccatgcagatatcatgtg
gttggctgcgacctgtcagtggagaaggagaagatccacgatcacgagcgcgcctgtgct
cacgaacatctcaacctgctgttgcactacatcatgggtatgaagctccagctgcacagc
gagaagaccaaggtggcggatctgggccgtcgctgccaggagctggaggtgaaggccggg
acgtttgaagacgtggtctgcgtgctaaaccgagaagtggagcgcttcgcaaccaccatg
gaggccagcaaccgccaacacagactcgatcaggacaaaatcgaggctcttagcaacaag
gtccgtcagctggagcggcaggtgggtgttaaagacctgactgtggctgagatggagggc
agattgcgggagatgtctgccaccacgtttgacggcgtcttcatctggcggatatcagat
ttcactaaaaagagacaagatgccattgctggacgggcgcctgccatgttttcacccgca
ttttacacaagcaagtatggctataagatgtgcctgcggatttacctgaacggggacggg
acgggtcgcggaacgcatctctcgctgttttttgtggtgatgagaggaacgagtgatgca
ctgctcaaatggcccttcaatcagaaggtgacgctgatgctgctggaccagagtaacaga
gagcacatcatcgacgcgttccgtcccgacatcacttcctcctcattccagaggcctgta
agcgatatgaacatcgccagcggctgcccgctcttctgcccgctgtccaagctggagggc
aagaactcatacatacgtgacgacaccatcttcatcaaagccatcgtggacctcactggc
ctttag

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