KEGG   Cyprinus carpio (common carp): 109071204Help
Entry
109071204         CDS       T05134                                 

Definition
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03410  Base excision repair
Module
ccar_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:ccar00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    109071204
Enzymes [BR:ccar01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109071204
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109071204
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 109071204
NCBI-ProteinID: XP_018943222
LinkDB All DBs
Position
Unknown
AA seq 1011 aa AA seqDB search
MPSLWLGRAVRTLSRSSLLKLCKKTSFRATPNHQSLQCSRTLIFSWGFVSSPSGIFFCVP
QIRQFSLSSGSYFHVSWPEWQSERPLMAEQRYCVEYAKRGTAGCKKCKDKIMKGLVRIGK
IVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIDDITELEGWEELQDDDKELINKHV
SELAAKGNSTPKKKVQAKLNNSGQLSAPLADPTVNAPRKFSGFTASKAGSSSSSPGPSPA
KPTQGSAFSTQLCDPNHKDCLLREFRKLCAIVAEKSGYNAKTEIIRDFLTKGSGGDKFRG
DLYLTVKLLLPGVVKNVYNLNDKQIVKLFSRILNCSQDEMVQDLEQGDVSETVRIFFEQS
KFFPPAAKSLLTIQEVDASLSRLSQLTKEDDQQAELQDIAKMCTGNDLKCYIRLVKHDLK
INSGAKHVLDAVDPNAYDAFKASRNLGDVIDRVLRNQQDASNGTGPRKILSVEASLMTPV
QPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNDNHFSYFSRSLKPVLPHKVAHF
KDFIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDAQVGLFVFDCIYFN
GISLMDKPLCERRKFLHDNMVEVPNRILFSEMKHVTRAADLAEMITRVIREGLEGLVLKD
IKGHYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPESR
KWCTVTKCSGGYDDATLARLQKELDVIKIGKDPSKIPGWLKIVKNYYPDFIIRDPEKAPV
WEITGAEFSKSEMHTADGISIRFPRCTRMRDDKDWKTATNLQQLKELYRISKENCDFDLT
AGPSKTSQNDKSSSGGESGGSSPSASHGASTANKTKNAHTPKAKAVKTKSSSPAVKRKLP
AEKQDAKKIKTEPLHSNGQSKLQTVQTTDPKNEKTLLDIFTGVKLYLPDSVQEFEKLRRY
FLAYDGDLVPVYDSVSATHTLGETEDDSPAQRVTSNWIWECIRKRRVVPPS
NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt
atgcccagtctttggcttggcagggcagtgaggacactcagcagatcatctttgctgaaa
ctttgtaagaaaacttcattcagagcaacaccaaatcatcagtctctccagtgttcgagg
actcttatattttcgtggggctttgtgtctagccccagtggcatctttttctgtgtgcca
caaattcgacagtttagtctcagctccggctcttatttccacgtttcttggcctgagtgg
caaagtgaacgaccactcatggcagagcagagatactgtgtggaatatgccaaacgtggc
acggctggctgcaagaaatgcaaagacaagatcatgaagggactggtccggattggcaag
atagtgccaaacccttttagtgagtctgcaggggaaatgaaggagtggtaccacgtgaag
tgcatttttgagaagcttgagagagcgcgtgccaccacaaagaagatcgacgacatcaca
gagctggagggatgggaagaacttcaggacgacgataaagaactaatcaataaacacgtt
tcagaactggcagccaaaggcaattcaaccccaaagaagaaagtgcaagcaaagttaaac
aacagtgggcagctgtcagcaccgcttgctgatccaacagtcaatgctcctcgcaagttt
tctggcttcacagcttccaaggcaggttcctcttcctccagtcctggaccatctccagcc
aaacccactcagggtagcgctttctcaactcagctatgtgaccccaaccataaagactgt
ttactgcgggagttccgcaaactttgtgccatagtcgcagagaagtccggctataacgcc
aagacagagatcatcagagacttcttgacaaaaggctctggtggagacaaattccgtgga
gatttgtacctgacagtgaagcttctcctcccaggagtggttaagaatgtctacaacctc
aatgacaaacagattgtcaagcttttcagccgcatattgaattgcagtcaggatgagatg
gtgcaagacttggaacagggagatgtttccgagacggtgcggatatttttcgagcagagt
aagtttttccctccagcagccaagagtcttctgactatccaagaggtggatgcttcactg
agccgtctatcccaactcacaaaggaggatgatcagcaggcagagctgcaggacattgct
aaaatgtgcaccggaaatgatctgaagtgttacattcgcttggtcaaacatgatcttaaa
atcaactctggggctaaacatgttttggatgctgtggaccctaatgcctatgatgccttc
aaagcctcccgtaaccttggtgacgtaattgaccgggtgctacggaaccagcaggatgct
tctaatggaacagggcccagaaagatcctcagcgtggaggcgtctctgatgacccccgta
cagccaatgctggcagaagcatgcaagtccattgagtatgccatgaagaagtgtcctaat
gggatgtattctgagatcaagtatgatggtgagcgtgtgcaggtccataagaatgacaat
cacttcagttacttcagtcgaagtctcaaaccagtactcccacacaaggtcgcccatttt
aaagatttcataccgcaggcatttcctggtggccatagcatgatccttgatgctgaagtt
cttcttattgatacaaagactagcaaaccgttgccttttgggactcttggagtacacaag
aaagcagctttccaggatgctcaagtgggtctgttcgtgttcgactgcatttattttaat
ggtatcagtctcatggacaagcctctctgtgagagaagaaagtttctccatgacaatatg
gtggaagttcctaacaggattcttttctcagaaatgaagcatgtcacgagagctgctgac
ctggcagaaatgatcacacgtgtcatcagagaaggactggaggggttggttctgaaggat
atcaagggacattatgaaccaggcaaacgtcactggttgaaggtgaagaaggactatctg
aatgaaggagcaatggcagacactgctgaccttgtggtgcttggagctttctatggcaaa
ggctcaaatggtggaattatgtccagtttcctcatgggatgctatgacccagaatccagg
aagtggtgcactgtgaccaagtgttcaggaggctatgacgacgccacattagccagacta
cagaaggagttggacgttatcaaaattgggaaggatccaagcaagatcccaggatggttg
aagatcgtcaagaactattacccagatttcattatccgtgatccagaaaaagcaccagtt
tgggaaataacaggagcagaattttccaaatcagaaatgcacactgcagatggcatatcc
attcgcttcccacgatgcactcgaatgcgagacgacaaggattggaagactgccactaac
cttcagcagctcaaggagctgtatcgtatttcaaaggagaactgtgattttgatctgaca
gctggtccgtccaaaactagccaaaatgacaagagctcctcaggaggcgagagtggagga
agctctccttctgcatctcatggagcttccacagctaacaagaccaaaaatgctcatact
cccaaagcaaaggcagtgaaaaccaaatcctcttcgccagcagttaagaggaaactaccc
gcagagaaacaagatgccaagaagataaaaacagaacctcttcacagcaatggacaaagc
aaattgcagaccgttcaaacaactgacccaaagaatgaaaagacactactggacattttc
acaggtgtgaagctttacctcccagattcagtgcaggaatttgagaagcttcggcgctac
ttcctagcgtacgatggagatctggtgcctgtgtatgactctgtttcagccacacataca
ctgggagagacggaggacgacagtccggcccagagggtcacctccaactggatctgggaa
tgcatccgaaagaggagggtggttcctcccagctga

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