Cyprinus carpio (common carp): 109078957
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Entry
109078957 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-R-like
KO
K06252
tenascin
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04510
Focal adhesion
ccar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109078957
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109078957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109078957
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109078957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
Interfer-bind
DUF4998
DUF3515
Motif
Other DBs
NCBI-GeneID:
109078957
NCBI-ProteinID:
XP_018949679
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MIFNHVYNINVPLESLCSVDLDTVPGPGTNRGTAGSDKMPTEYTEETVDSDSQVTFTHRI
NIPKQACACPAAAAMEQLANRVEMLEREVSLLRAQCSSSCCGESSVMGRLDFVPQCGHGT
FSMEVCGCVCEEGWIGKNCSEPHCPDDCSGQGICIEGECVCDRNFGGENCSEPRCPGDCS
DRGLCIDGECVCEEAFAGEDCSLGRCLNDCSDQGTCVNGTCQCRPGFLGEDCSLIFCANN
CSQKGVCKDGFCACQEGYTGDDCASVSPPMNLRVRGVSENTIDLEWEGPVILTDYLITYA
PTTPGGVQLEIRVPGNVTNTTIKGLEPGLEYNINVYAVIDNIISAPMNTLVSTYLSNPDG
LLFKSIMETSVEVQWQPLDYLFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGLRPGEEY
TVNLVALKDQGRSQPVTATVITLIDGPTQLIVRDISDTVAFVEWSPPKAKVDQIILRYGL
LGVDGPKTTFRLQPTLSQYSLQVLRPGSTYEVSVSGVWNGTESGAISTEFITEIDAPKNL
RVLSKTSTSLELEWDNSEADVEGYRVVYSTLAGDQYDKVIVPRNDGATTKTTLTDLLPGT
EYGIGISAVLGANQSSPATMNARTGLDVPLDLTVTASTDNTITLLWGTVQGPIDHYKVTY
TSSTGVTTELTVPKDVNTTTLTGLEPGTEYTITVAAQRGRQQSTAATIDAFTGFRPITQL
FFSDVTSDSLTVAWSAPAPPADAFSLNYNAQDSSDDSEIALDGSKXQITLTGLLPSRRYT
VTLVTMHGNVTSKPVLGSVATGMDPPRDMSVLYVTEESVTISWIQPLAPFDYYKMSYQSP
KGRMDNVVIDNDITNYTLTSLHPATEYEIKLNAVRGSQESKVITTTVFTAMDMPMELTAL
NVTPQGALLRWNPPVSSVDNYVLTLTRNQVTADTFLVEGNKQEYQLSQLIPSTTYSVALY
ATKGPLTSGTVIANFVTPMDAPQNLTASEINHRSALISWQPPIADIDNYMLTYKAADGSR
KELILDAEDTWIRLEGLAETTEYTVRLQAARGLETSAIVSTSFTTGNRLFPTPQNCAQHL
LNGETLSGIYTIYINRDLSQGVQVYCDMTTDGGGWIVFQRRQNGLTDFSRKWSDYKIGFG
NLEDEFWLGLDNIQKIAAQGRYELRIDMKDGQESVYANYDRFSIGDSKSLYKLRIGEYNG
TAGDSLSYHQSRPFSTKDKDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHSQGIN
WYHWKGHEFSIPFVEMKMRPFNYRSISGKRRRSTH
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgatctttaatcatgtatacaacatcaatgtacctctagagtcactctgttcagtggac
cttgacacggtaccagggccagggacaaacagaggtacagctgggagtgacaagatgccg
acagagtatacagaagagacagtggactcggacagccaggtgaccttcacccatcgcatc
aatatcccaaagcaggcctgtgcttgtcctgcggctgccgccatggaacagctggctaac
cgcgtagagatgctggagagggaggtgtccttgcttcgagcacagtgtagctccagctgc
tgcggagagagctctgttatgggtcgcttggacttcgtccctcagtgtggccatggcacg
ttcagtatggaggtttgtgggtgtgtttgtgaagaaggatggattggcaagaactgctct
gaaccccactgtccagatgactgctccggccaaggcatttgcatcgaaggcgagtgtgta
tgcgaccgtaactttggcggtgagaactgctcggagcctcgatgtccaggtgattgctct
gacagggggttgtgcattgatggcgagtgtgtttgtgaggaagcctttgctggagaggac
tgctcgctgggcagatgtctgaacgactgctcagatcaaggaacctgtgtgaacggaacc
tgtcagtgccgacctggcttcctgggggaagactgctctctcatcttctgtgctaataac
tgcagccagaaaggggtgtgtaaggatggtttctgtgcctgtcaagagggatatacagga
gatgactgcgcttcagtgtcacctcctatgaatctgcgagttcggggagtgtcagagaac
accattgatctggaatgggaggggcctgtgatcctgacagactatctcatcacttacgcc
cccacaacccctggtggagtccaactagagatcagagtcccaggaaatgttaccaacacc
accatcaaagggttggagccgggtctggagtacaacatcaatgtgtatgcggtgatcgac
aacatcataagtgccccaatgaacaccttagtctccacctatctctcgaatccagacggt
ttactcttcaaatccatcatggagacatctgtggaggttcagtggcaacccttagactac
ttgtttgatggttgggaaataagcttcattcccaaggacaatgatggagggatgacagca
caactacccagtaccatcacgtcgttccaccaaacagggctgcggcctggggaagaatac
actgtcaacctggtggccttgaaagaccagggaaggagccagcctgttactgcaaccgtt
ataacacttatagatggaccaacacagcttattgtacgagacatctcagacacagttgcc
tttgtggaatggagcccacccaaggctaaagtggaccagattatattgcgatatgggctg
ttaggggtggacggaccaaagaccacctttcgcctgcagcctactctgagccagtactcc
ctccaagtcctaaggcctggatccacgtatgaagtatcagtcagtggagtctggaatggc
actgagagtggagccatttccacagagtttattacagaaatcgatgcaccaaagaacctg
agagtgctgtcgaaaacttccactagcctggagctggaatgggacaatagtgaggcagat
gtagaaggctacagggtggtttacagcacactggctggtgatcagtatgacaaagtcatt
gtcccacgcaatgatggtgccaccaccaaaactactctcactgatttgctgcctggcaca
gagtatggcataggaatttcagcagttctaggcgccaaccaaagctccccagcaacgatg
aatgccagaacgggtctggatgtcccattggatttgactgtcacagcctccacagacaac
accatcaccctgttgtggggcacagtgcaggggcctattgatcactataaagtgacctac
acttcctccactggagtcacaactgagctgacggtgcccaaggacgtcaacaccaccaca
ctgacaggtctagagccgggcaccgagtacaccattacagttgcagcacagagaggcagg
cagcagagcactgcagctactattgatgccttcacagggttccgccctatcacacagctc
ttcttctccgatgtcacttctgattcattgactgtggcatggagtgcaccggcaccgcct
gctgacgcattcagcttgaactacaatgctcaggactccagtgatgattctgagattgct
ctagatgggtccaaanaccaaatcacactcactggtctcctgccctccaggcggtacact
gttaccctggttaccatgcacggcaatgtgacctcaaagccagttttaggctcagtcgca
acaggtatggaccctcccagagatatgagtgtgctgtacgtcacagaggaatctgtaacc
atatcatggattcaaccactcgcaccctttgattactataaaatgtcttaccaatcacca
aaaggtaggatggacaatgtggtgattgacaatgacatcaccaactacaccctaaccagc
ctccatccagcaacggagtacgagatcaagctgaacgcagtgagaggaagccaagagagc
aaggtcatcaccactactgtctttacagctatggacatgcctatggagctcactgcattg
aatgttacacctcagggggctctgctgcgttggaacccccctgtttccagtgttgataac
tatgtgctcaccctcacccggaaccaagttacggcagacaccttcttagtggagggcaac
aagcaggagtaccagctgagtcagctcatccccagcaccacctactcagtggctctttat
gccactaaaggtcctctcaccagtggcacagtcattgcaaactttgtcacacccatggat
gcaccccagaacctgacagctagtgagattaaccatcgaagcgccctcatatcctggcag
ccgcccatcgcagacatcgataactacatgttgacctacaaagcagcagacggcagtcga
aaggagctgatcttagatgccgaagacacatggatccgtctcgaggggcttgcagagacc
actgaatatactgtgagactgcaagccgccagaggattagagaccagcgccattgtttct
acatctttcacaacaggaaaccgattgtttcccacgccacagaactgtgcacaacacctc
ctgaatggagagacgctgagcggaatttacaccatctacatcaacagagacctcagccaa
ggtgtgcaggtttactgcgacatgaccaccgatggaggcggctggatagtgttccagcga
cgtcagaacggtttgactgatttctccaggaagtggagtgactacaagatcggctttggc
aacctggaggatgaattctggcttggcttggacaacattcagaagattgcagctcaaggt
cgttatgagctccgcattgacatgaaagatggccaggagtctgtatatgccaactatgac
aggttttccattggagattccaagagcctctacaaactgcggataggagagtataatggc
accgcaggtgactctctaagctaccaccagagcagacctttctctaccaaggacaaggac
aatgatatcgctgtcaccaactgtgcattgtcctacaaaggagcctggtggtacaaaaac
tgccatcgggccaaccttaacggcaaatacggagagtccagacatagtcagggtataaac
tggtatcactggaaaggccatgagttttccatcccttttgtggagatgaagatgagacct
tttaactaccgcagcatcagtggcaagcggaggaggtccacccattaa
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integrated database retrieval system
