Cyprinus carpio (common carp): 109084830
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Entry
109084830 CDS
T05134
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109084830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109084830
03016 Transfer RNA biogenesis [BR:
ccar03016
]
109084830
Enzymes [BR:
ccar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109084830
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109084830
Transfer RNA biogenesis [BR:
ccar03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109084830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
GH3
Motif
Other DBs
NCBI-GeneID:
109084830
NCBI-ProteinID:
XP_018955024
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMHIWETTQTLGNLYFNNNCNTASAKLTSGGGDGASSNAAD
SSVKPKDHRGMSGSKPDSVVSDQQDFIPLEANNSSRGVGGGQVGGSRVAVVGTELPSKRK
RDNKASTFGFNRNLLLTDGVEDIYTGTPWKSRNYSEGIVGLHEEIKDFYEYISPRPEEDH
MRQEVVARIQRVIKDLWPNAEVEVFGSFSTGLYLPTSDIDLVVFGHWETLPLWTLEEALR
KRKIADENSIKVLDKATVPIIKLTDLHTEVKVDISFNVQNGVKAAKLIKNFKQQFPVLPY
LVLVLKQFLLQRELNEVFTGGIGSYSLFLMVVSFLQLHYREDVCSSNPNLGVLLIEFFEL
YGRHFNYLKTGIRIKDGGSYVAKDEVQKGMLDGYRPSMLYIEDPLQPGTNTNPHTHMHYF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagaatcgcctggtttcagccagaacagcgcggacctgccaacaacctgtgg
atgcacatctgggaaacgacgcagacgctgggaaacctctacttcaacaacaactgcaac
acagccagcgccaaactgacgagcggtggaggcgacggagcgtcgagcaacgcggccgac
agcagcgtcaagcccaaggatcatcgggggatgtctggatccaaacccgacagtgtggtc
tccgatcaacaagactttatccctctggaagccaataacagcagtaggggtgtcggcgga
gggcaagtgggtggcagtagggtcgcagtcgtaggaacggagttgccaagcaagaggaaa
agagacaataaggcgagcaccttcggttttaacaggaatcttctgctgacagatggggtg
gaggacatttacactggcacaccgtggaagagcagaaactactcggaaggcattgtgggg
ctgcatgaggagataaaggacttttatgagtatatttctcctcgtccagaggaagaccac
atgaggcaagaggtggtggccaggatccagagagtcatcaaggacttgtggccaaatgct
gaggttgaagtgtttggcagcttcagcacaggcttgtatttacctacaagtgatatagac
ttggtggtttttggtcactgggagactttacctctctggactctggaagaggcgctacgc
aagagaaaaattgcagatgagaactctatcaaagtcctggacaaagcaacggttcccatc
attaaactgacagacttgcacacagaggtaaaagtggacatcagctttaatgtacagaac
ggtgttaaagctgcaaaactcatcaagaacttcaaacagcaatttcccgtattaccgtac
ctggtgctggttttgaagcagtttttgctgcaaagagagctgaatgaggtttttacggga
ggcatcggatcatacagtctgttcctcatggttgtcagctttttacagctgcactacaga
gaggatgtgtgtagttcaaacccaaacctgggtgtactgctgattgagttttttgagctg
tacggacggcattttaactacctgaagacagggatcaggataaaagacggtggctcttac
gtggccaaggatgaagtgcagaaaggcatgctggatgggtacagaccctctatgctttac
attgaggatcctttgcagccaggtacaaacacaaaccctcacacacacatgcactatttt
taa
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integrated database retrieval system
