Cyprinus carpio (common carp): 109090287
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Entry
109090287 CDS
T05134
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109090287
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109090287
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
Motif
Other DBs
NCBI-GeneID:
109090287
NCBI-ProteinID:
XP_018959633
UniProt:
A0A8C2IFW7
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Position
10:775985..778352
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AA seq
297 aa
AA seq
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MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHVSAKPAVNNQQQQISDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDY
KYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYTGMQTD
ALGYSQQLHRYDLSALQYPSAMATAQSYMNGANSYNPMSYSSTPQQPSPVMSMVKPDQVS
HSPTGVHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgacatgaagtccgccgtgccaccgacgcaccagagcgcg
cagggaatgacccagctgaacggtggagtgactcatgtatccgccaaaccggctgtcaac
aaccaacaacaacagattagcgatcctatggacaaagttaagaggcccatgaacgcgttt
atggtatggtctcggggtcagaggcgcaagatggcacaggagaaccccaaaatgcataac
tctgagatcagcaagcgcctgggcgccgagtggaagctgctgacggacgcggagaaacgg
ccttttattgacgaggccaagcggcttcgcgcgctgcacatgaaggaatacccagattat
aaatacaaaccccgtcgtaagacgaaacccgtgctgaagaaggacaacccggctgctaag
tatcccctatcagccggcaacttactggcggcagccgcggctcaaggatcaggtggaagc
ccgcggatggacagctacggctggggtcacacaggtggctacactggcatgcagacggat
gctctgggttacagtcagcagctgcaccgctatgatctgtccgccctccagtatccatcc
gccatggccaccgcacagtcttacatgaatggtgccaactcctacaaccccatgtcctac
agcagcactccacagcagcccagcccggtcatgtccatggtgaaaccagaccaggtgtct
cattctcccaccggagtacacagccaccagcggggtcctttacaaggagacctgagggac
atgattagcatgtacatccctggtggagacaccacagacagtggagcacagagaggctat
tccaacatccaacagcattacctcaccggtacagcacctctcactcacatctga
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integrated database retrieval system