Cyprinus carpio (common carp): 109095029
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Entry
109095029 CDS
T05134
Symbol
spidr
Name
(RefSeq) DNA repair-scaffolding protein
KO
K22806
DNA repair-scaffolding protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109095029 (spidr)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109095029 (spidr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4503
TF_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
109095029
NCBI-ProteinID:
XP_018964228
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All DBs
Position
16:19691764..19730022
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AA seq
471 aa
AA seq
DB search
MGNGAVVLGKCNCVTGKRSVGELNRSGVRKSLLDAVEDCGSSGSQSGPVEVVVQRVYCIP
ITQSLHRTSLQHRALDKPPPESVPPQHIGRLCALVQDSYGMFGEVLLHCVSTESEIQQNS
EQLEGHVCLLQALRVIQRLTRDKCSLLFSMIDSLWPPPVDPKSHDDLLRSPSDRVPPPCF
CYRLSIQLGHMVPLSGQTESPLYRPPVLQTLREILQDESSRRRCSFRATVVHKQLLSSNA
GDREMLLFVTDPSLQREPNTDRNRRTIAVCLSSSCLIQSSVTQALDALRTQPVLMFRDAV
EENAQIFCWEQTVIQLEPEDSSFSIPRPIILDHLGPETPPYTLCTVTGVVVAVDESTAFS
WPTCSFCESCRLETREHQKGFLCLACGAVVDEPTTKMQLEVFLSCSSLSHCTVKIKLQQK
TIKSLLNSTSCTEGYSVENLLGSEIGPLSVFVHVVNRSHTVWIGLEECDLH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatggagcagtagtgctgggcaagtgtaactgtgtgacagggaagaggagtgtc
ggtgagttgaacagaagcggagttcggaagtctctgctggacgcagtggaggattgtggg
tcgtcgggctctcagagcggtcctgttgaggtggtcgttcagagggtctactgcataccc
attacccagtccctacacagaacttctctccagcacagagcgcttgacaaacctccacca
gaatcagtaccaccgcaacacatcggcaggttgtgtgctctagttcaggacagttacggg
atgttcggggaggttcttctgcactgtgtgtccacagaatcagagatccagcagaactcg
gagcagctggagggccatgtgtgtctcctccaggccctgagagtcatccagcgtctcaca
cgcgacaaatgttctctgctcttcagtatgattgacagtttgtggcctcctccggttgat
ccaaaatctcatgacgatcttctgcggtctcccagtgatcgagtcccaccgccctgtttc
tgctataggctgagcatccagctgggacacatggttccgttatcaggacagactgaatct
ccactgtaccgaccacctgtacttcagactctaagagagatcctccaggatgaatcttcg
aggcgtcgttgcagctttcgggccactgtggttcataaacaattactgagctcaaatgca
ggcgacagggagatgctgctgtttgtgacagatcccagtctccaaagggagccaaacaca
gacaggaacaggagaaccatagctgtgtgtctgagctcgtcctgcctgatccagagctca
gtcacacaggccctggacgccctgcggacacagcctgttctgatgttcagagacgccgtg
gaggagaatgctcagatattctgctgggaacagacggtgatccaactggagccagaggac
tcatccttctccataccacggcccatcatactggaccacctgggtccagaaaccccccca
tacactctctgcactgtcacaggtgtggtggtagcagtggatgaaagcacagcgttctcc
tggcccacctgcagcttttgtgagagctgccgtttagagactcgagaacatcagaaagga
ttcctctgtttagcatgtggagcagtggtggatgaacccaccacaaagatgcagctggag
gtgtttctgagctgctcctcactgagccactgcactgtcaaaatcaagttgcagcaaaag
accattaaatctcttttaaactcgaccagctgtacagagggttacagtgtggaaaatctt
cttgggtcggagatcggtcctctcagcgtcttcgtccacgtggtcaacagaagtcacact
gtttggataggtttggaggagtgtgacctgcactga
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