KEGG   Cyprinus carpio (common carp): 109098978
Entry
109098978         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: period circadian protein homolog 2-like
  KO
K21945  period circadian protein 3
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109098978
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109098978
SSDB
Motif
Pfam: Per3-like_PAS-A Period_C PAS_3 PAS_11 PAS Spt46 DUF4455
Other DBs
NCBI-GeneID: 109098978
NCBI-ProteinID: XP_018968083
LinkDB
Position
22:4752218..4949262
AA seq 1093 aa
MNSGHDSSSGNDSVGGSRHHHSSSSCSPGSTTGSGSTKSSKSATGSSSSSFHSAHHTECS
EQTEHGREQTHREMMQTVQEMKKRLPSEKRSRSKASTVEALNYALNCVKQVQANSEYYNL
LMSSGLEERRNATVCTLEELEGITSEHTPKNTDTFVVVFSLASGKVVYASEQASSVLHCK
RKFLESAKFVELLYHQDVSVFYSHTAQPRLPPWNMGTDSAAVLFECAQVKSFFCRIRGGK
DRDGEMRYSPFRITPYLLKVQGSSAEEEPCCLALAERIISGYEAPRIPMDKRIFSTTHSP
GCVFLEVDDRAVPLLGYLPQDLIGTSVLTCLHPDDRLLMLAMHRKILKYAGQPPFEHSPI
RFRCQNGDYITLDSSWSSFINPWSRKVAFIIGRHKVRTGPLNEDVFATRSKAEQPIMCED
IKELQAMIYKLFLQPVHNNGSSGYGSLGSNGSHEHYISVASSSDSNGNLWDDSHREPMTL
QQFCADVNKVKKWGQQAYLDSRRKLTPLGPATAGLEYVFPASGLRIRDHLKQSLQEARKQ
PHIPSYQQINCVDSIIRXSEMCIIFHLKIKNRRLYLMDSQVSAGSATTAAVVGAPLTDIT
ISTEAMSVVSITSQCSYSSTIVHVPQPESEVTALEDAPMGSEPTDSAPTPARPAPSTSSA
AQEELLVVGLTKEVLSAHTQKEEQQFVDRFQHRILQSPYSSYLQQDNSSMAHSHHRGDVV
RPPNKHKRPKPEDSSDSYGSLPGNYWSPPGPTGAPHSSWPSSESSQPPRSNIGFVPPMAV
PMQTAPYFTVVGANQQPMVVQPDQGVQNLQPMHPMTPTMVVLLPSYPMYPGSNGMYLQGM
PVPAPGVIPQPPFNIGGYVPPGGHVPHGSPSQGHPPGPTVTGVGMAQGASAEVDSIPAPW
FGEDLDAAQPTALFSSSRSSSPIQLNLLQEELTKPTEAQNSTGPESLREHHAKAEDAPSE
SGNQDAHSTSSXMLDQLLQEDARSGTGSNASGSGSGESGGSLGSGSGLGSNGTSTSHTDS
SNSSKYFASNDSSDTSRKARKSAEAQEHERATFTKHVDNPLWSMIKQTPKPVMMTYQIGP
RYQTRNFSSSLFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgaacagcggtcacgactccagcagcggtaatgacagtgtcggtggctcacgacatcat
cattcctcgtccagttgcagccctggaagcaccacaggatccggaagcaccaagagctca
aaatctgccactggttcctcatcgtccagttttcacagcgcgcatcacacagagtgcagt
gagcagacggagcacggccgtgagcagacgcaccgagagatgatgcagacggtgcaggag
atgaagaaacgactgccgtcagagaagagaagccgcagtaaagccagtactgtggaggca
ctgaactacgcactgaactgtgtcaaacaagtacaagcaaacagcgagtactacaactta
ctaatgagcagcggactggaggagagacgaaacgctactgtgtgcacgctggaggagctg
gagggaatcacatcagaacacacgccgaaaaacactgacacgtttgtggtggtcttctct
ctggcctctgggaaggtggtttatgcgtctgaacaggcctccagcgtgcttcactgcaag
aggaagtttctggaatctgccaagttcgtggagctgctgtaccatcaggacgtcagtgtg
ttttactcgcacacggcgcagccgcgactgccgccctggaacatgggcacagacagcgcg
gcggttctgtttgaatgtgcccaggtcaagtccttcttctgtcgaatcagaggagggaaa
gatagagatggagagatgcgttatagtcctttccggatcactccgtacctgctgaaggtt
cagggatcgagtgcagaggaggagccgtgctgtctggccctggccgaacgcatcatctca
ggatatgaggcccctcgcattcccatggacaagcgcatattcagcacgactcattcacca
ggctgtgtctttttagaagtggatgaccgagcggtgcctttgctcggctacctccctcag
gacctgatcggtacctcagttctgacctgcctgcatccagacgaccgcctgctcatgctg
gccatgcaccgcaaaattctgaagtatgcaggccagcctccgtttgaacactcgcccatc
cgctttcggtgtcagaacggcgactacatcaccctggactctagctggtccagcttcatc
aacccttggagccgaaaggtggccttcatcatcggcaggcacaaagttcgcactggacct
ctgaatgaggacgtttttgccacgcggagtaaagccgagcagccgatcatgtgtgaggac
attaaagagctgcaagccatgatctacaagctcttccttcagccggttcataataatgga
tccagtggctatggcagtctgggtagtaacggctcccacgagcactacatcagtgtggcg
tcgtccagcgacagtaacggaaacctctgggacgattcgcacagagaaccaatgacattg
cagcagttttgtgctgatgtcaataaagtgaagaagtggggccagcaggcgtatctggac
tcccggaggaagctcacacctttaggaccagccactgcaggtctggagtatgtctttcct
gcatctggtttgagaattagagatcatctaaagcagtctctgcaagaagcacggaaacag
ccacacattccatcctaccagcagatcaactgtgtggacagcatcatcaggtgaagtgaa
atgtgcattatttttcacttgaaaatcaaaaatagaagattatatttgatggacagccag
gtgtctgcgggctcggccacgacggcagcggtggtgggagcgccgctcacagacatcaca
atctccacagaagccatgagcgtggtgtccatcaccagtcagtgcagttacagcagcacc
atagtgcacgtaccccagcccgagtcagaggtcactgccttagaagatgctccaatgggt
agcgagccaacagactccgcccccacccctgcacgccccgcccccagcacctcctcagcg
gctcaggaggagttactcgtggtgggtcttactaaagaggtgctgtcggcccacacgcaa
aaggaggagcaacaattcgtggatcgtttccaacatcgaatcctgcagagtccctacagc
tcctacctccagcaggacaacagcagcatggcccattctcatcacagaggtgatgttgtg
cgtcctcccaacaaacacaagcgtcccaaaccagaagactcatccgacagctatggctcc
ctgccgggcaactactggtcacctcccggccccacaggagcgcctcattcctcctggcct
tcctcagagtcctctcagcccccgcggtccaacatcggctttgtgccgcccatggcagtg
cccatgcaaacggccccttacttcactgtggttggtgcgaatcagcagcccatggtggtc
cagcctgaccaaggtgtccagaacctccaacccatgcatcccatgactcccacgatggtc
gtcctgcttcctagctaccccatgtaccccgggagcaatggcatgtacctgcaggggatg
cccgtcccggcgcctggagtcattccccagcctcccttcaatatcggtggctacgtccca
cctggtggacacgtgccacatgggtctccgtcgcagggccatcctccaggtcccactgtc
acaggagtcgggatggcacagggtgcctcagcagaggtcgactcaatacccgccccttgg
tttggggaagaccttgatgcagcacagcccacggcgctcttctccagctctcgctccagc
tctcccatccagctgaacttactccaggaggagctgaccaagcccaccgaagcccagaac
agcaccggtccagagagtctgcgtgaacaccacgccaaagcggaggatgctcccagcgag
tcgggtaaccaagacgcccattctacctccagtngaatgcttgaccagttgctacaggag
gacgcccgctcaggaaccggctcaaatgcgtcgggcagtggctcgggagagtcgggaggc
tctctgggctccgggtcaggactcggttctaacggaacatccaccagccatacagacagc
agcaacagcagcaagtacttcgccagcaacgattcatcagacacatcgcggaaagctcgc
aagtctgcggaggcccaggaacatgagcgtgcgaccttcacaaagcacgtggacaatccg
ttatggagcatgatcaagcagacgcccaaacctgtcatgatgacctatcagatcggtccc
aggtaccagaccaggaacttttcttcctctctctttctctga

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