Cyprinus carpio (common carp): 109100023
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Entry
109100023 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04110
Cell cycle
ccar04218
Cellular senescence
ccar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109100023
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109100023
04218 Cellular senescence
109100023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109100023
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
109100023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
109100023
NCBI-ProteinID:
XP_018969068
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All DBs
Position
24:complement(1802035..1813262)
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AA seq
1051 aa
AA seq
DB search
MRGDETDSESVKSDDGSVRRSLEALCQELNMDEETAAEALQNFSSIWNTYTLEGDVVHWL
ACSLYAACRKSSIPTVGRGVMEGNGVSLTRILRSAKLSLIQFFSKMKKWSDMSNLSQDFR
SRVGLLERNFEVSTVIFRKFEPIFLDMFQNPQGEPPRLSRSRKHRRLPCHISDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFCNALMCSNKKDLINQYFRGLPKDTENLEE
IPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKRVKKGDAETLTELLDTPNFQDNN
KSINREYEEYVLTVGDFDERVFLGADADEEIGTPRKATAEPPSGQLSARMHVENNLQQHF
EKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSEALVQIFNSC
SRNPTESILNRVKTMGERFKQAYTKPTDDLPGAHMDFAENRLKLAEILYFKILENIMTQE
MKRLQGKDMAVLLEQEVLHCSLLACCLEVVLFAYSSQRTFPWILEIFQIPPFYFYKVIEV
FIRSEEGLSRDMVKHLNSIEEQVLESKAWTRDSALWTALNNANNKVPTVEEVNFPSNFDT
GNNAGGPTHLPLVALSPIIHPRIREVRTGLGSSARKDVPQSPISLHDRYSSPAAGSAKRR
LFGDDPPPQSPVKRISVTPIKIIPNTTENNQNTTTTTTVLSMATGNGQQLTIPLPVVKNQ
TGGITVIQLQASDMHPLTAQFLLTASPSRTAAPPTSSDTQPPAVNRPRRTGSLALFFRKV
YHLASVRLRDLCLKLDISSELRGKIWTCFEHSLLHCTDLMKDRHLDQLLLCAVYIISKIT
KQEHTFQDIMKCYRTQPQANSHVYRSVLLKRRPREQQTDENMEVDPPAEQSNERTEQANT
TEADSESEERGDLIQFYNSVYVLKMKSFALKYAHSTLDNKMEAPPLSPFPSVRAQPLSPR
RVSQRHSIFVSPHKTXSSLTPSTAYTYKFTGSPSKELSDINQMIRQGGVSKKRAFTMEGD
DTESPSKCLRQENDDVLLKRLQDVVSERASL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggagatgaaacggattcggagtccgttaaatcagacgatggttcggttcggagg
agtctcgaggcgctctgtcaggagctcaatatggacgaagagacggcggcagaagcgctt
cagaacttcagctccatctggaacacttacacgctcgagggtgatgtggttcactggttg
gcctgctctctgtatgctgcctgtaggaagagctccatccccaccgtgggacggggtgtg
atggagggcaacggcgtttcccttacaaggatcctgcgttcggcgaagctcagtttgatc
cagttcttcagcaagatgaagaaatggtcagacatgtcgaacctctctcaggatttccgc
agccgtgtaggtctactggaacgtaatttcgaagtgtcgacagtgatttttcgtaaattt
gagccaatatttctggacatgtttcagaatcctcagggtgaacctccccgtctgtctaga
agccgcaaacaccggcgtcttccatgccacataagtgacgtcttcaagttctgttggact
ctctttgtgtatacaaaaggcaatttccgtatgattggtgatgacctggtcaactcgtat
cacctcctgctctgctgtctggacctggtgttttgcaacgccctcatgtgttccaacaag
aaagatctcatcaatcaatacttcagaggactgccgaaggatacagaaaacttggaggaa
ataccctgtgtcattgacaagttgtgtgagctgcatgatggcttggtggtggaggccaaa
ggcataaaggagcactacttcaaaccctacataaagacactgtttgagaaaagagtgaaa
aaaggtgatgctgagactctgactgaattactggataccccaaatttccaagacaacaat
aaatccataaatcgtgagtatgaggaatatgttttgactgtgggggattttgatgagcga
gtgtttttgggggccgacgcagacgaggagatcggaacacctcgcaaggccaccgctgag
cctccatcaggtcaactatccgcccgcatgcacgtggagaacaaccttcagcagcacttt
gagaagacgcgttcccttgctccctctacgcctctaacgggtcgacggtatctgaaggag
aaagaggtgctggtcacccccgtttcctcagctacccaaagtgtgagtcgactgcagagc
atggtgtccggcctccgaaacgctccaagcgaagctctggtccaaatctttaattcctgc
tctcgaaatcccactgaatccattctgaaccgagtgaagaccatgggagagaggtttaaa
caggcctacaccaaacccacagatgacctgccaggagcacatatggattttgcagagaat
cgtctgaagctggcggagatcttgtactttaagatcctggagaatatcatgactcaagag
atgaagagattacaagggaaagacatggcggtcctgttggagcaggaggtgctccattgt
tcactgttggcgtgctgtctggaggtggtgctttttgcgtacagctctcaaagaacattc
ccctggatactagaaatcttccagataccgccattctacttttacaaggtgattgaggtg
ttcatccgctccgaggagggtttgtcccgagacatggtgaagcatttgaacagtatagag
gagcaggtgctggaaagcaaagcctggaccagagactcggccctgtggacagcactcaat
aatgctaataataaagtccccactgtagaagaggtgaattttcccagtaattttgacacg
ggcaacaatgcaggcggtcccactcacctcccattggtggcgctgtctcccatcatacac
cctcgcatcagggaggtccgcacaggcctgggctccagcgcacgcaaagacgtccctcag
tctcccatctctctccacgaccgctacagctcacctgcagccggcagcgctaagagacgc
ttgtttggtgacgatcctccaccacagtccccagtgaaaagaatctcagtcactcccatc
aaaatcattcccaacaccacagaaaacaaccagaacaccaccaccacaacgacggtcctc
tccatggccactggaaacggccagcagctcaccattccactgccggtggtaaagaaccag
acgggcggcatcacagtcatccaacttcaggccagtgatatgcaccccctcaccgctcaa
ttcttactgaccgcctcccccagccgaaccgcagctccacccaccagctccgacacacag
ccaccggccgtcaacagaccccgccgcactggatccctcgccctcttctttaggaaggtg
tatcatttagccagcgtgcgtctgcgggacctgtgtctgaagctggatatctcatcagag
ctgcgagggaagatctggacgtgttttgagcactctctgctgcactgcactgacctgatg
aaggacaggcacctggaccagctgctgctctgtgccgtctacattatatcaaagatcaca
aaacaagagcacacttttcaggacattatgaaatgctaccgaacccaacctcaagccaac
agtcacgtgtaccgcagtgttttactgaagaggcgacccagagaacagcagaccgatgag
aacatggaagtggatccgccggcagaacagtccaatgagaggacggaacaggcaaacaca
acagaggctgacagcgaatcagaggaaagaggagacctcatccagttctacaactctgtt
tatgtgctaaagatgaaatcatttgctctcaaatatgcacattccacacttgataacaag
atggaggctcctccgttatctccgttcccgtcggttcgcgctcagcctctctctcctcgc
cgtgtatctcagagacactccatctttgtctctcctcataaaacgnnctcaagtctcaca
cccagtactgcctacacatacaagttcactggcagcccatcaaaggagctgagtgacata
aaccagatgatccgtcagggtggggtgagcaagaagcgtgcgttcaccatggaaggtgac
gatactgagtctccatctaaatgtctgcggcaagagaacgacgacgtgcttctcaagcgc
ctgcaggatgtggtcagcgagagagcgagtctctaa
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