Cyprinus carpio (common carp): 109103613
Help
Entry
109103613 CDS
T05134
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109103613
Cell adhesion molecules [BR:
ccar04515
]
Cadherins
Cadherin related
109103613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ribosomal_L4
RET_CLD1
Cadherin_pro
Glrx-like
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
109103613
NCBI-ProteinID:
XP_018972535
LinkDB
All DBs
Position
29:complement(12292868..12318233)
Genome browser
AA seq
704 aa
AA seq
DB search
MKSKGRTIMDPLHQNRTWWWILVIFYVALQLMTIHSSMVPGTLQLQLDEEQPAGTVVGDI
SAGLPPDMTATHYFISDHQGTGIGTDLDIDESTGIIKTAKVLDREVRDRYSFIAVTITGI
TVEVTILVNDINDHAPVFPRKRATFKIPEQTTIGTKFPLEPALDADEDQLTTQGYIITDG
NVGQAFLLETKRGSNKVLYLDLVVNTVLDRETRSSYTLLLEAFDGGSPKRTGQMILDVIV
QDINDNAPVFNQSRYHAVISENLQPGNNILQVFASDADEGDNGLVLYDINRRQSDPDRYF
VIDIRTGVITLNKPLDFEMRRVHELVVQARDNASQPEVTNAFVTIQVRDYNDNQPTMTII
FLSEDGSPRISEGAQPGQYVARILVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLIC
VDQILDREEQDHYELRVLATDSGTPPLRAESSFTIQVTDVNDNPPLFDQPEYTQVIPEVA
FPGSFVVQVTARDKDQGPNGDVQYSILQNEETHSDWFSVDAVTGIVTTLTQLDYETDPMP
SITVVAADRGRPPLSSTAVVKVILQDINDNEPVFGSKFYNASIKENTAAGTCFMEDYLHI
VDSLEIPTPDPHYLLELVQHRQWGDSVLIVDVGDEFPQNILKATEDLKTVNIIPAIGLNV
HSMLKHESLVLTLEAVKFLEKKLLWHDVRYTPLYPFKLPYRDMP
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaaaggaaggacgattatggatccgttgcatcaaaacaggacttggtggtgg
atattggtgatcttctatgtggcgctacaactcatgaccatccactcatccatggtgcca
ggaacgttgcagctccagctagatgaggaacagccagcaggaactgtagtaggagacatt
agtgctggcctcccacctgacatgactgcaacccattatttcatctcagatcatcagggt
acaggcatcggcaccgatctggacatcgatgagagtacagggatcataaaaaccgcaaag
gtcttggaccgggaagtacgggaccgttacagcttcatagcagtcaccataactggaata
actgtagaagtcaccatcttagtaaatgacatcaacgaccacgctccagtgttcccaaga
aaaagagccacgtttaagattccagaacagacaaccattggcaccaagtttcctcttgag
cctgctttggatgcagatgaggaccagctcactacgcaaggctacatcataacggatgga
aatgtaggacaagcttttcttcttgaaaccaaacgaggatccaacaaagtgctctacttg
gatttggtagtcaatacagttttggacagagagacgagatcttcgtacactctactcttg
gaagcatttgatggtggctcacccaagaggacagggcaaatgatcctggatgtgattgtg
caggacatcaatgacaacgccccagtcttcaaccagagtcgctaccatgcagtgatctca
gagaaccttcaacctgggaacaatatactgcaggtatttgcttcagatgctgatgaaggc
gacaacgggttggtgctctacgacatcaacaggagacagagcgatcctgatcgctacttt
gtcattgacattcgaactggagttatcactctgaacaagcctttggatttcgagatgaga
agagttcacgagcttgtggtacaggctcgggacaatgctagtcaaccagaggtcaccaat
gctttcgtgaccatccaggtgcgagactacaatgacaaccagcccaccatgaccatcatc
ttcctcagtgaggatggttctccacgcatctctgaaggagcgcagcctggccagtacgtg
gctaggattttggtcacggatcctgattatggagaatatgccaatgtgaatgtgtctttg
gaagggggtgatggaaagtttgctttgaccaccaaagacagcatcatctatctcatctgc
gtagatcagatccttgatcgtgaagagcaagaccattatgaactcagagtcttggccaca
gattctggcactcctcctttacgggcagagtcttcatttaccattcaggtcacggatgtt
aacgacaacccacctttgtttgaccagccagaatacacccaggttattccagaggttgcc
tttccgggaagttttgttgtacaggtaacagcacgggacaaagaccaggggcccaacgga
gatgttcagtacagcatcctacagaacgaagaaactcattcagactggttcagtgttgac
gcagtcactggtatcgtcaccaccttgacccagctcgattacgaaacggaccctatgccg
agtataactgtggttgctgcagacaggggtcgaccacctttatcttctacagctgtggtc
aaagtgatcctacaggatattaatgataatgaacctgtgtttggcagcaagttctacaat
gcatccattaaggagaacaccgcagcagggacctgtttcatggaggattaccttcatatt
gtggactcactggagattcccactccagacccccactacctcctggagctggtccaacac
aggcagtggggggattcagtcctcatcgttgatgtaggcgatgaattccctcagaacatt
cttaaggcgactgaagatctgaaaacagtgaatatcattccagccataggtctgaacgtc
cacagcatgttgaaacacgagagtctggttctcactctggaggctgtaaaatttcttgaa
aagaagcttctttggcatgatgtgcgctacactcccctgtatcccttcaaactcccatac
cgtgacatgccatga
DBGET
integrated database retrieval system
