Cyprinus carpio (common carp): 109111834
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Entry
109111834 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109111834
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109111834
Membrane trafficking [BR:
ccar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109111834
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
109111834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Myosin_tail_1
GAS
TolA_bind_tri
TPR_MLP1_2
BLOC1_2
DUF5082
YezG-like
WEMBL
Jnk-SapK_ap_N
Prominin
Motif
Other DBs
NCBI-GeneID:
109111834
NCBI-ProteinID:
XP_018980368
UniProt:
A0A9Q9VK11
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All DBs
Position
38:19144899..19154289
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AA seq
444 aa
AA seq
DB search
MEPQRAFSSYRKRFGTSGGSPSVGVTSRHSTGRLSLHSSPRHLTSSPITLSTSRLSLGGE
RLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASYIEKVRFLEQQNKMLVAELNQLRGKE
PSRLGDIYQEELRELRRQVDGLNAGKARLEIERDNLASDLATLKQRLQDETALRQEAENN
LNTFRQDVDEAALNRVQLERKIDALQDEISFLKKVHEEEMMQLQEQLIAQQVHVDLDVSK
PDLTTALKEIRAQFEAMATSNMQETEEWYRSKFADLTDAASRNTEALRQAKQEANEYRRQ
IQGLTCDLESLRGSNESLERQLREMEERFTIETAGYQDTVARLEDEIQMLKEEMARHLQE
YQDLLNVKLALDIEIATYRKLLEGEESRITVPVQNFTNLQFRDTSLDTKLTPEAHVKRSI
VVRTVETRDGEIIKESTTERNDLP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagccccagcgagctttctcatcctaccgaaagcgtttcgggacttcgggcggctcc
ccgtccgtgggggtcaccagccgccacagcacaggccgcctgtccctccacagcagcccg
cgccacctgacctccagccccatcaccctgtccacctcgcgtctgtccctgggcggggag
cggctggacttctctgcggactccctgctgaaggcccagtaccgggagacgcgcaccaat
gagaaagtggagatgatggggttgaatgaccgcttcgccagctacattgagaaagtgcgc
ttcctggagcagcagaacaagatgctggtggcggaactgaaccagctgagggggaaggag
cccagccgtctgggggacatctaccaggaggagctgagggagctccgcaggcaggtggac
ggtctcaacgctggtaaagccagactggagattgaaagagacaacctggcctcagacctg
gccactcttaaacagagacttcaagatgaaactgccctacggcaagaagcagaaaacaac
ctcaacaccttcagacaagatgtggatgaagcagctctgaaccgcgtacagctggagagg
aagattgatgctctgcaggatgagatcagtttcctgaagaaggtccatgaggaggagatg
atgcagctgcaggagcagctgattgcccaacaggttcatgtggatctggatgtgtctaag
ccagacttaaccactgccctgaaggagatcagagctcagttcgaggccatggccacctcc
aatatgcaggagactgaggagtggtatcgctcgaagtttgctgatctgactgatgcagcc
agccgtaacacagaggctctgagacaagctaagcaggaggccaacgagtatcgtcgacag
attcagggcttgacctgtgacctggaatctcttcgtggatctaacgagtccctggagcgt
cagctgcgagagatggaggagcggttcaccatagagacggccggttaccaggacacagtg
gcccgtctggaggatgagatccagatgctgaaggaggagatggccagacacttgcaggag
taccaggatctgctcaatgtaaaactggctctggatattgaaattgccacctacaggaag
ctgctcgaaggagaggaaagcagaatcactgttccggtgcagaacttcaccaacttacag
tttagagacaccagcttggacactaagctgactcctgaggcgcatgtgaaaaggagcata
gtcgtgcgaaccgttgagactcgtgatggagagatcattaaggagtccaccacggagaga
aacgatctgccgtaa
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