Cynara cardunculus var. scolymus (artichoke): 112500143
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Entry
112500143 CDS
T05604
Name
(RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00071
Fatty acid degradation
ccav00592
alpha-Linolenic acid metabolism
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
ccav01212
Fatty acid metabolism
Module
ccav_M00087
beta-Oxidation
ccav_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112500143
00592 alpha-Linolenic acid metabolism
112500143
Enzymes [BR:
ccav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
112500143
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
112500143
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
112500143
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
112500143
NCBI-ProteinID:
XP_024959237
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Position
LG 17:36367320..36381975
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AA seq
727 aa
AA seq
DB search
MGEIEVKMEVGFDGVAIITFSNPPVNAFAISIIASLKEKIGEAMSRDDVKAIVLTGKHGM
FSGGFDINVFQNVQKTGNLSLLPDFSIDFVVNTIEDAKKPIVAAIEGLALGAGLEVAMGC
HARIAAPKAQLGLPELSLGVIPGGGGTQRLPRLLGLPKAIEMILTSKPILSEEGKTLGLI
DDVVPPQELLKVSRQWALDIANERKPWVRSLHCVDKIGSISEVNEVIKFARHQAKRTAPN
LTHPQACLDVIEEGIVQGGHPGVLKEREVFSDLVVSDTSKGLVHVFFAQRATSKVRNVTD
KGIKPRAVKKVAIIGGGLMGSGIATSLIVSNTYVVLKEVDSEYLQKGIKMIEENVRGLVA
KKKLSQPRAEKALSMIEGVLDYSEFNDVDMVIETVTEDLQLKQEIFGEIEKVCPPHCIFA
TNTSAIDLDLIGEKLGCQDRVVGAHFFSPAHLMPLLEIVRTEKTSVQVIIDLMTVGKIIK
KVPVVVGNCTGFAVNRAFFPYKQSAHMLLHLGVDLFRIDRLIRNFGFPMGPFQLEDLSGY
GVAVAVSKRYATAFPDRSFYSPLTELLIKDGRNGKNNGKGYYVYEKGSKPKPDPLVLPII
EESIRLANLMPEGKPISVTDQEIVEMVLFPVVNEACRVLEEGIVTRVIDLDIASVLGMSF
PSERGGIMFWADLVGSKHIYTSLKNWSEEYGNLYKPSRFLEERAMNGVPLSAPVSATPKT
TSSSSQP
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggagagattgaagtgaaaatggaagtagggtttgatggtgttgccatcatcaccttc
tctaatcctcctgttaatgcctttgcaatctcaattattgcttcgttgaaggagaaaatt
ggagaagctatgagcagagatgatgtaaaagcgatcgttttgactggcaaacatgggatg
ttttcaggtggatttgacatcaatgtgttccaaaacgttcaaaagactggaaacttatct
cttctacctgatttttccattgactttgtggtcaacacgattgaagatgcaaagaaacct
atagttgccgcgatagaaggacttgcacttggggctggattagaagttgcaatgggatgt
catgcacgtattgcagctccaaaggctcaactcggcttgcccgaattgtctcttggagtt
atccctggcggcggaggtacccaacgacttccaaggctattgggtttgccaaaggcaatt
gagatgatattgacatctaaaccgatactctctgaagaagggaaaacgctaggtctcatt
gatgacgttgtgcctcctcaagagttgttgaaagtctctaggcaatgggcattagacatc
gccaacgagcgtaaaccttgggtccgctcgcttcactgtgtagacaagattggttcgata
tctgaagtgaatgaggtaattaagtttgctaggcaccaagccaaacgaaccgcgcctaat
ttgacacatcctcaggcgtgcctcgatgtaattgaggaaggcatcgtgcagggaggacac
cccggtgttttgaaggagcgagaagtgtttagcgatcttgttgtttcagacacctcgaaa
ggtcttgttcacgtgttctttgcacaacgtgcaacctcaaaggtacgtaatgtcactgat
aaagggatcaagccaagggcggtcaagaaagttgctatcatcggtggaggtttaatgggt
tcgggaatagctacatcccttatagttagtaatacgtacgttgttcttaaggaagtcgac
tccgagtatcttcaaaaggggataaaaatgatcgaagaaaatgtccgaggtttggttgcg
aagaaaaagttgtcacaaccccgagcggagaaagcgttgtcgatgattgaaggggtattg
gactactcggaattcaacgatgtggatatggtcatagagactgttactgaggatcttcag
ttaaagcaagaaatcttcggtgaaatcgagaaggtgtgtccccctcattgcattttcgca
accaacacgtcggccattgacctcgacttaattggagagaaactgggatgtcaagatcga
gtcgtgggcgcacatttcttcagtcctgctcatttgatgccgttgttggagatcgttcga
accgaaaagacttccgtacaagtgatcatcgatctcatgacagtcgggaaaatcataaag
aaagtccctgtcgtcgtgggaaattgtacgggctttgccgttaatcgcgccttctttcca
tacaaacaaagtgcacacatgttgcttcatttaggtgtcgacttgtttagaatcgaccga
ctgatccgcaacttcgggttcccaatgggaccattccagcttgaagacttgagtggatat
ggtgtagcagttgctgttagtaaaagatatgccacagcttttcctgatcgatcattctac
tctcctcttactgagcttctaatcaaagatggacgaaatggtaaaaacaatgggaaaggg
tattacgtttacgaaaaaggtagcaagccaaagcctgatcctctcgtgctaccaattatc
gaggagtcgataaggctagccaatcttatgccggaaggaaagcccatatccgtcaccgac
caagaaatagtcgagatggtactctttccggtggtgaatgaggcatgtcgtgttctagag
gaaggaatcgttactcgagtaattgaccttgacattgcatctgttcttggcatgagtttc
ccttctgaacgtggtggcatcatgttttgggcagatttggttgggagtaaacacatatat
acaagtctcaagaattggtccgaagaatatggcaacttgtataaaccatcaagattcttg
gaagaaagagctatgaatggtgtcccattgagtgcacctgtttcagcaacacctaaaacc
acaagttctagttctcaaccgtaa
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